Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB3D65_RS10695 Genome accession   NZ_CP165606
Coordinates   2163364..2163555 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain BP1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2158364..2168555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3D65_RS10670 (AB3D65_10670) - 2158723..2159709 (-) 987 WP_025284553.1 ABC transporter ATP-binding protein -
  AB3D65_RS10675 (AB3D65_10675) - 2159883..2160668 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  AB3D65_RS10680 (AB3D65_10680) fabF 2160751..2161989 (-) 1239 WP_369546818.1 beta-ketoacyl-ACP synthase II -
  AB3D65_RS10685 (AB3D65_10685) - 2162012..2162950 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  AB3D65_RS10690 (AB3D65_10690) - 2163117..2163335 (+) 219 WP_007409123.1 hypothetical protein -
  AB3D65_RS10695 (AB3D65_10695) comZ 2163364..2163555 (-) 192 WP_003155061.1 ComZ family protein Regulator
  AB3D65_RS10700 (AB3D65_10700) med 2163568..2164521 (-) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  AB3D65_RS10705 (AB3D65_10705) - 2164611..2165177 (-) 567 WP_369546819.1 hypothetical protein -
  AB3D65_RS10710 (AB3D65_10710) - 2165260..2165994 (-) 735 WP_012117276.1 hypothetical protein -
  AB3D65_RS10715 (AB3D65_10715) - 2166255..2166440 (+) 186 WP_007409129.1 YjzD family protein -
  AB3D65_RS10720 (AB3D65_10720) - 2166477..2166656 (-) 180 WP_003155070.1 YjzC family protein -
  AB3D65_RS10725 (AB3D65_10725) argF 2166732..2167703 (-) 972 WP_059367242.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1030808 AB3D65_RS10695 WP_003155061.1 2163364..2163555(-) (comZ) [Bacillus velezensis strain BP1]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1030808 AB3D65_RS10695 WP_003155061.1 2163364..2163555(-) (comZ) [Bacillus velezensis strain BP1]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment