Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   AB6L51_RS11500 Genome accession   NZ_CP163562
Coordinates   2237101..2237904 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain BC255T1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2232101..2242904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6L51_RS11485 (AB6L51_11500) - 2234317..2234553 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  AB6L51_RS11490 (AB6L51_11505) - 2234587..2235324 (-) 738 WP_017367573.1 glycerophosphodiester phosphodiesterase -
  AB6L51_RS11495 (AB6L51_11510) - 2235551..2236651 (-) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  AB6L51_RS11500 (AB6L51_11515) spo0A 2237101..2237904 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  AB6L51_RS11505 (AB6L51_11520) spoIVB 2238188..2239465 (-) 1278 WP_017367575.1 SpoIVB peptidase -
  AB6L51_RS11510 (AB6L51_11525) recN 2239664..2241397 (-) 1734 WP_017367576.1 DNA repair protein RecN Machinery gene
  AB6L51_RS11515 (AB6L51_11530) ahrC 2241432..2241881 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=1030672 AB6L51_RS11500 WP_008342226.1 2237101..2237904(-) (spo0A) [Bacillus altitudinis strain BC255T1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1030672 AB6L51_RS11500 WP_008342226.1 2237101..2237904(-) (spo0A) [Bacillus altitudinis strain BC255T1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATCCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment