Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB6L51_RS07105 Genome accession   NZ_CP163562
Coordinates   1383657..1384118 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus altitudinis strain BC255T1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378657..1389118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6L51_RS07080 (AB6L51_07085) - 1379060..1379944 (+) 885 WP_017359428.1 cation diffusion facilitator family transporter -
  AB6L51_RS07085 (AB6L51_07090) - 1380009..1380161 (-) 153 WP_017367142.1 hypothetical protein -
  AB6L51_RS07090 (AB6L51_07095) - 1380462..1381001 (+) 540 WP_007498690.1 RDD family protein -
  AB6L51_RS07095 (AB6L51_07100) - 1381127..1382437 (+) 1311 WP_017359426.1 MFS transporter -
  AB6L51_RS07100 (AB6L51_07105) - 1382511..1383419 (+) 909 WP_008348035.1 chemotaxis protein -
  AB6L51_RS07105 (AB6L51_07110) kre 1383657..1384118 (-) 462 WP_008356877.1 YkyB family protein Regulator
  AB6L51_RS07110 (AB6L51_07115) - 1384338..1385234 (-) 897 WP_025207256.1 AraC family transcriptional regulator -
  AB6L51_RS07115 (AB6L51_07120) - 1385348..1386292 (+) 945 WP_025207257.1 DMT family transporter -
  AB6L51_RS07120 (AB6L51_07125) - 1386449..1386664 (-) 216 WP_008348016.1 hypothetical protein -
  AB6L51_RS07125 (AB6L51_07130) - 1386830..1387006 (+) 177 WP_164999005.1 hypothetical protein -
  AB6L51_RS07130 (AB6L51_07135) - 1387235..1388512 (-) 1278 WP_008348012.1 MFS transporter -
  AB6L51_RS07135 (AB6L51_07140) - 1388586..1389083 (-) 498 WP_019743906.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=1030663 AB6L51_RS07105 WP_008356877.1 1383657..1384118(-) (kre) [Bacillus altitudinis strain BC255T1]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1030663 AB6L51_RS07105 WP_008356877.1 1383657..1384118(-) (kre) [Bacillus altitudinis strain BC255T1]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCAAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment