Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB6L51_RS05510 Genome accession   NZ_CP163562
Coordinates   1076973..1077923 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain BC255T1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1071973..1082923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6L51_RS05490 (AB6L51_05500) - 1073208..1073690 (+) 483 WP_407974690.1 hypothetical protein -
  AB6L51_RS05495 (AB6L51_05505) - 1073721..1075160 (-) 1440 WP_171465157.1 PLP-dependent aminotransferase family protein -
  AB6L51_RS05500 (AB6L51_05510) - 1075304..1076473 (+) 1170 WP_407974691.1 MFS transporter -
  AB6L51_RS05505 (AB6L51_05515) - 1076536..1076814 (+) 279 WP_407974692.1 barstar family protein -
  AB6L51_RS05510 (AB6L51_05520) ceuB 1076973..1077923 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  AB6L51_RS05515 (AB6L51_05525) - 1077916..1078866 (+) 951 WP_144740683.1 iron chelate uptake ABC transporter family permease subunit -
  AB6L51_RS05520 (AB6L51_05530) - 1078857..1079615 (+) 759 WP_079919112.1 ABC transporter ATP-binding protein -
  AB6L51_RS05525 (AB6L51_05535) - 1079638..1080582 (+) 945 WP_035700179.1 siderophore ABC transporter substrate-binding protein -
  AB6L51_RS05530 (AB6L51_05540) - 1080722..1081678 (+) 957 WP_008348636.1 LCP family protein -
  AB6L51_RS05535 (AB6L51_05545) - 1081713..1082147 (-) 435 WP_116306680.1 enoyl-CoA hydratase -
  AB6L51_RS05540 (AB6L51_05550) - 1082233..1082595 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=1030651 AB6L51_RS05510 WP_017366964.1 1076973..1077923(+) (ceuB) [Bacillus altitudinis strain BC255T1]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1030651 AB6L51_RS05510 WP_017366964.1 1076973..1077923(+) (ceuB) [Bacillus altitudinis strain BC255T1]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAAGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment