Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   AB6L51_RS01965 Genome accession   NZ_CP163562
Coordinates   361408..361836 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain BC255T1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 356408..366836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6L51_RS01935 (AB6L51_01940) - 356552..356881 (+) 330 WP_007498247.1 YckD family protein -
  AB6L51_RS01940 (AB6L51_01945) - 356928..357692 (-) 765 WP_048001305.1 MBL fold metallo-hydrolase -
  AB6L51_RS01945 (AB6L51_01950) - 357808..358227 (+) 420 WP_181566828.1 Lrp/AsnC family transcriptional regulator -
  AB6L51_RS01950 (AB6L51_01955) - 358252..359058 (+) 807 WP_017358552.1 aminoglycoside N(3)-acetyltransferase -
  AB6L51_RS01955 (AB6L51_01960) comJ 359060..359446 (-) 387 WP_081114847.1 competence protein ComJ -
  AB6L51_RS01960 (AB6L51_01965) - 359584..361281 (-) 1698 WP_099496297.1 methyl-accepting chemotaxis protein -
  AB6L51_RS01965 (AB6L51_01970) nucA/comI 361408..361836 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AB6L51_RS01970 (AB6L51_01975) - 362203..364272 (+) 2070 WP_017366592.1 hydantoinase/oxoprolinase family protein -
  AB6L51_RS01975 (AB6L51_01980) - 364262..366247 (+) 1986 WP_017366593.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=1030644 AB6L51_RS01965 WP_007498233.1 361408..361836(-) (nucA/comI) [Bacillus altitudinis strain BC255T1]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=1030644 AB6L51_RS01965 WP_007498233.1 361408..361836(-) (nucA/comI) [Bacillus altitudinis strain BC255T1]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment