Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AB6M97_RS11040 Genome accession   NZ_CP163514
Coordinates   2226921..2227688 (+) Length   255 a.a.
NCBI ID   WP_121835379.1    Uniprot ID   -
Organism   Streptococcus hillyeri strain S23-3001-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2221921..2232688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M97_RS11025 (AB6M97_11025) - 2224268..2224966 (-) 699 WP_121835373.1 YoaK family protein -
  AB6M97_RS11030 (AB6M97_11030) rlmH 2224986..2225465 (-) 480 WP_369350826.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB6M97_RS11035 (AB6M97_11035) - 2225665..2226857 (+) 1193 Protein_2118 S1C family serine protease -
  AB6M97_RS11040 (AB6M97_11040) spo0J 2226921..2227688 (+) 768 WP_121835379.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29280.71 Da        Isoelectric Point: 9.4032

>NTDB_id=1030385 AB6M97_RS11040 WP_121835379.1 2226921..2227688(+) (spo0J) [Streptococcus hillyeri strain S23-3001-1]
MTERLQVIKIEQIQKNPYQPRLSFNEDELIDLANSIKENGLIQPIIVRKSDVFGYELIAGERRLRASKIAGLEEIPAIIK
EISDDDSMKQAIIENLQRSNLNPIEEAKAYQQMIDKKQVTHEDLARYMGKSRPYISNLLRLLNLPLSLQEAVTSGKLSQG
HARVLLSLNEEKEQEFWAKEINEKQLSVRQLEAFILGKKTKKQVSKNPFITDYEKELSQQLGLPVKITASKSHKGKVTIQ
FSTEEDFHRIINSLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1030385 AB6M97_RS11040 WP_121835379.1 2226921..2227688(+) (spo0J) [Streptococcus hillyeri strain S23-3001-1]
ATGACAGAACGTTTACAGGTTATCAAAATTGAACAGATTCAAAAAAATCCCTACCAACCTAGGTTAAGTTTCAATGAAGA
TGAATTGATTGATTTGGCAAATTCTATTAAAGAGAATGGTCTCATTCAGCCAATTATTGTTCGAAAATCAGATGTTTTTG
GATATGAACTCATTGCAGGTGAGAGAAGGCTACGAGCCTCTAAAATAGCTGGCTTAGAAGAAATCCCAGCAATTATTAAG
GAAATTTCTGATGATGATAGTATGAAACAGGCTATTATTGAAAATCTTCAACGCTCTAACCTTAATCCCATTGAAGAAGC
CAAAGCCTATCAACAAATGATTGATAAAAAACAAGTCACACACGAAGATCTAGCACGTTATATGGGGAAATCACGCCCCT
ACATCAGTAATCTTCTTCGTTTACTAAATCTACCACTAAGTCTTCAAGAAGCCGTTACGTCTGGAAAACTTTCTCAAGGA
CATGCGCGTGTGCTCCTCAGCCTCAATGAAGAAAAAGAACAAGAATTTTGGGCAAAGGAAATTAATGAGAAACAGCTCAG
TGTTAGACAGCTAGAGGCTTTTATTTTAGGTAAGAAAACGAAAAAGCAAGTCTCTAAAAATCCTTTTATCACCGATTATG
AAAAAGAGCTCAGCCAACAACTAGGATTACCTGTAAAAATCACAGCCAGCAAATCACATAAAGGGAAAGTCACCATCCAA
TTTTCAACCGAAGAAGATTTCCACAGAATTATCAACAGTCTAAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(148-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.392

100

0.604

Multiple sequence alignment