Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   AB6M97_RS09880 Genome accession   NZ_CP163514
Coordinates   2011760..2012470 (+) Length   236 a.a.
NCBI ID   WP_121836308.1    Uniprot ID   A0A3L9DS77
Organism   Streptococcus hillyeri strain S23-3001-1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2006760..2017470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M97_RS09855 (AB6M97_09855) - 2006939..2007322 (-) 384 WP_121836312.1 DUF3021 domain-containing protein -
  AB6M97_RS09860 (AB6M97_09860) - 2007331..2007654 (-) 324 WP_121836311.1 DUF3021 family protein -
  AB6M97_RS09865 (AB6M97_09865) - 2007660..2008109 (-) 450 WP_121836310.1 LytTR family DNA-binding domain-containing protein -
  AB6M97_RS09870 (AB6M97_09870) treC 2008261..2009886 (-) 1626 WP_369350698.1 alpha,alpha-phosphotrehalase -
  AB6M97_RS09875 (AB6M97_09875) treP 2010147..2011595 (-) 1449 Protein_1908 PTS system trehalose-specific EIIBC component -
  AB6M97_RS09880 (AB6M97_09880) treR 2011760..2012470 (+) 711 WP_121836308.1 trehalose operon repressor Regulator
  AB6M97_RS09885 (AB6M97_09885) - 2012624..2013223 (+) 600 WP_121836307.1 hypothetical protein -
  AB6M97_RS09890 (AB6M97_09890) dtd 2013347..2013790 (-) 444 WP_121836306.1 D-aminoacyl-tRNA deacylase -
  AB6M97_RS09895 (AB6M97_09895) - 2013799..2016018 (-) 2220 WP_121836305.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27160.28 Da        Isoelectric Point: 8.8285

>NTDB_id=1030369 AB6M97_RS09880 WP_121836308.1 2011760..2012470(+) (treR) [Streptococcus hillyeri strain S23-3001-1]
MKKYEHIYKELENRILSGQYPVGHYLPTEMELCEQFSASRDTVRKALSLLTKEGLIIKSQGRGSQVKKQELINFPVSELS
SYQELVALHGITSKTNVISLDNLIVDDELRKLTGFPVGTHVFRITRQRVVDNVASVLDIDYLLKPIVPSISREIAEQSIY
AYLEKELGLAISYAQKQITIDNARDQDKILLDLGSDKHVVCIRSKVYLADNRQFQFTESRHKLEKFQFIDFARRKL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=1030369 AB6M97_RS09880 WP_121836308.1 2011760..2012470(+) (treR) [Streptococcus hillyeri strain S23-3001-1]
ATGAAAAAATACGAACACATTTATAAAGAATTAGAAAATAGAATTTTATCCGGACAGTACCCAGTCGGACATTACCTGCC
CACTGAAATGGAACTTTGTGAGCAATTTTCAGCCAGTCGAGACACCGTCCGTAAAGCGCTCAGCCTTTTAACCAAGGAAG
GCTTAATCATAAAATCTCAAGGACGCGGATCTCAGGTCAAAAAACAAGAACTCATTAATTTCCCTGTATCTGAGCTATCC
AGCTATCAAGAACTGGTCGCCCTACACGGAATAACTTCAAAAACCAATGTCATCAGCCTTGATAATCTCATCGTCGATGA
CGAACTGCGCAAGCTAACTGGCTTTCCTGTCGGAACCCATGTTTTTCGTATCACGCGCCAACGCGTTGTTGACAATGTCG
CTTCCGTTCTAGACATCGATTACCTCCTCAAGCCAATTGTCCCTTCGATATCACGGGAAATTGCAGAGCAGTCTATCTAT
GCCTACCTTGAAAAAGAACTTGGTCTAGCCATCTCTTATGCCCAAAAACAAATTACCATTGATAACGCCAGAGACCAAGA
TAAAATTTTACTAGACCTCGGAAGTGATAAACACGTGGTCTGCATCCGCTCCAAAGTCTATCTGGCAGACAATCGCCAAT
TCCAGTTTACCGAAAGCCGGCACAAACTAGAAAAATTCCAATTCATTGACTTTGCACGGAGAAAGTTGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(90-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L9DS77

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.103

99.153

0.636

Multiple sequence alignment