Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AB6M97_RS02980 Genome accession   NZ_CP163514
Coordinates   595970..597010 (+) Length   346 a.a.
NCBI ID   WP_121834954.1    Uniprot ID   A0A3L9DWF3
Organism   Streptococcus hillyeri strain S23-3001-1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 590970..602010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M97_RS02920 (AB6M97_02920) - 591153..591413 (+) 261 WP_121834941.1 hypothetical protein -
  AB6M97_RS02925 (AB6M97_02925) - 591415..591615 (+) 201 WP_121834942.1 hypothetical protein -
  AB6M97_RS02930 (AB6M97_02930) - 591638..591820 (+) 183 WP_121834943.1 hypothetical protein -
  AB6M97_RS02935 (AB6M97_02935) - 591822..592022 (+) 201 WP_121834944.1 hypothetical protein -
  AB6M97_RS02940 (AB6M97_02940) - 592044..592283 (+) 240 WP_121834945.1 hypothetical protein -
  AB6M97_RS02945 (AB6M97_02945) - 592286..592597 (+) 312 WP_121834946.1 hypothetical protein -
  AB6M97_RS02950 (AB6M97_02950) - 592603..592812 (+) 210 WP_121834947.1 helix-turn-helix transcriptional regulator -
  AB6M97_RS02955 (AB6M97_02955) - 592825..593184 (+) 360 WP_121834948.1 hypothetical protein -
  AB6M97_RS02960 (AB6M97_02960) - 593171..593938 (+) 768 WP_369351077.1 DUF3169 family protein -
  AB6M97_RS02965 (AB6M97_02965) - 593951..594619 (+) 669 WP_121834950.1 CPBP family intramembrane glutamic endopeptidase -
  AB6M97_RS02970 (AB6M97_02970) rsmD 594684..595223 (+) 540 WP_121834951.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AB6M97_RS02975 (AB6M97_02975) coaD 595495..595983 (+) 489 WP_121834953.1 pantetheine-phosphate adenylyltransferase -
  AB6M97_RS02980 (AB6M97_02980) sepM 595970..597010 (+) 1041 WP_121834954.1 SepM family pheromone-processing serine protease Regulator
  AB6M97_RS02985 (AB6M97_02985) - 597007..597462 (+) 456 WP_369351079.1 GNAT family N-acetyltransferase -
  AB6M97_RS02990 (AB6M97_02990) ybeY 597603..598100 (+) 498 WP_121834956.1 rRNA maturation RNase YbeY -
  AB6M97_RS02995 (AB6M97_02995) - 598081..598482 (+) 402 WP_121834957.1 diacylglycerol kinase family protein -
  AB6M97_RS03000 (AB6M97_03000) cls 598587..600161 (+) 1575 WP_121834958.1 cardiolipin synthase -
  AB6M97_RS03005 (AB6M97_03005) - 600909..601460 (-) 552 WP_121834959.1 hypothetical protein -

Sequence


Protein


Download         Length: 346 a.a.        Molecular weight: 37452.65 Da        Isoelectric Point: 4.3836

>NTDB_id=1030338 AB6M97_RS02980 WP_121834954.1 595970..597010(+) (sepM) [Streptococcus hillyeri strain S23-3001-1]
MTIIKKFKWWLVGLVGLMTVLGIFFLPLPYYIEMPGGAFDIRSVLSVDGTADEEDGAYSFVAVNVSKATPIKILAAWLTP
HMEISSAEETTGGVSDDDYWRISQFYMKTSQNAAISEALTLAGEEVELDYLGVYVLSLDDKSTFKEILHLADTVTGVNGE
KFSSSKELIDYVGALKLGDDVTVQYISDGNQLSASGKIIKLDNGRNGIGISLVDHTEIVTDHSIEFFTDGVGGPSAGMMF
TLSIYDQLIEEDLRKGRLIAGTGTIEKGGAVGDIGGAGLKVVAADKAGSEIFFVPDNPIEKGMEKYYPKGNNYEEAKAVA
KELGTDMKIVPVKNVKDAIDYLRKNP

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1030338 AB6M97_RS02980 WP_121834954.1 595970..597010(+) (sepM) [Streptococcus hillyeri strain S23-3001-1]
ATGACAATAATTAAAAAGTTTAAATGGTGGTTAGTCGGTCTTGTAGGCTTGATGACTGTATTAGGGATATTTTTCCTTCC
ACTTCCCTACTATATTGAAATGCCAGGCGGAGCTTTTGACATTCGCTCGGTGCTTAGTGTTGATGGAACGGCAGACGAAG
AAGATGGAGCTTATAGTTTTGTGGCTGTCAACGTGTCCAAAGCAACGCCTATTAAGATTTTAGCAGCTTGGTTAACCCCA
CACATGGAAATTTCATCAGCTGAGGAGACGACAGGTGGTGTTTCAGATGACGATTATTGGCGAATTAGTCAATTTTACAT
GAAGACATCACAAAATGCAGCCATTAGTGAGGCGCTTACCTTGGCTGGCGAAGAAGTTGAATTAGACTATCTGGGCGTTT
ATGTGCTCAGCTTGGATGACAAATCAACTTTTAAAGAGATTCTTCACCTTGCCGACACAGTAACAGGTGTCAATGGCGAA
AAGTTTTCAAGCTCTAAAGAATTGATTGATTACGTTGGTGCTCTCAAACTTGGGGATGATGTGACGGTTCAGTATATTTC
AGATGGCAATCAGCTTTCTGCTTCTGGAAAAATTATCAAGCTTGATAATGGGCGAAATGGTATCGGAATTAGCCTTGTCG
ATCACACGGAAATTGTGACCGATCACTCCATTGAGTTTTTCACAGATGGTGTCGGGGGTCCAAGTGCTGGTATGATGTTC
ACGCTTAGTATCTATGACCAGCTTATTGAGGAAGATTTGCGAAAAGGGCGTCTTATCGCTGGTACAGGTACGATTGAAAA
AGGCGGAGCAGTAGGCGATATTGGTGGCGCTGGACTGAAAGTCGTAGCTGCTGATAAAGCTGGTTCGGAGATCTTCTTTG
TCCCAGATAATCCAATTGAAAAAGGAATGGAAAAATATTATCCAAAAGGGAATAACTATGAAGAAGCCAAGGCTGTCGCT
AAGGAATTGGGGACAGATATGAAGATTGTGCCCGTCAAAAATGTTAAGGATGCTATTGATTATTTAAGGAAAAATCCATG
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3L9DWF3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.295

100

0.633


Multiple sequence alignment