Detailed information NTG1029965

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB4K06_RS06265
• Genome accession: NZ_CP163458
• Coordinates: 1206629..1207582 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain N33
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1201629..1212582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4K06_RS06240 (AB4K06_06240)	argF	1203461..1204420 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
AB4K06_RS06245 (AB4K06_06245)	-	1204506..1204685 (+)	180	WP_003245356.1	YjzC family protein	-
AB4K06_RS06250 (AB4K06_06250)	-	1204731..1204916 (-)	186	WP_003245236.1	YjzD family protein	-
AB4K06_RS06255 (AB4K06_06255)	-	1205165..1205899 (+)	735	WP_003245223.1	hypothetical protein	-
AB4K06_RS06260 (AB4K06_06260)	-	1205981..1206538 (+)	558	WP_003232974.1	hypothetical protein	-
AB4K06_RS06265 (AB4K06_06265)	med	1206629..1207582 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
AB4K06_RS06270 (AB4K06_06270)	comZ	1207597..1207788 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AB4K06_RS06275 (AB4K06_06275)	yjzB	1207818..1208057 (-)	240	WP_003232972.1	spore coat protein YjzB	-
AB4K06_RS06280 (AB4K06_06280)	fabH	1208222..1209160 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AB4K06_RS06285 (AB4K06_06285)	fabF	1209183..1210424 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AB4K06_RS06290 (AB4K06_06290)	-	1210500..1211285 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
AB4K06_RS06295 (AB4K06_06295)	appD	1211477..1212463 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=1029965 AB4K06_RS06265 WP_003245494.1 1206629..1207582(+) (med) [Bacillus subtilis strain N33]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1029965 AB4K06_RS06265 WP_003245494.1 1206629..1207582(+) (med) [Bacillus subtilis strain N33]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1