Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AB4K06_RS01990 | Genome accession | NZ_CP163458 |
| Coordinates | 372154..372603 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain N33 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 367154..377603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4K06_RS01955 (AB4K06_01955) | yckA | 367305..367985 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| AB4K06_RS01960 (AB4K06_01960) | yckB | 367995..368858 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| AB4K06_RS01965 (AB4K06_01965) | - | 369020..369217 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| AB4K06_RS01970 (AB4K06_01970) | yckC | 369236..369691 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| AB4K06_RS01975 (AB4K06_01975) | yckD | 369773..370105 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| AB4K06_RS01980 (AB4K06_01980) | bglC | 370259..371692 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| AB4K06_RS01985 (AB4K06_01985) | nin/comJ | 371729..372127 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| AB4K06_RS01990 (AB4K06_01990) | nucA/comI | 372154..372603 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| AB4K06_RS01995 (AB4K06_01995) | tlpC | 372771..374492 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| AB4K06_RS02000 (AB4K06_02000) | hxlB | 374603..375160 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| AB4K06_RS02005 (AB4K06_02005) | hxlA | 375166..375798 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| AB4K06_RS02010 (AB4K06_02010) | hxlR | 376032..376394 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=1029946 AB4K06_RS01990 WP_003246436.1 372154..372603(-) (nucA/comI) [Bacillus subtilis strain N33]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1029946 AB4K06_RS01990 WP_003246436.1 372154..372603(-) (nucA/comI) [Bacillus subtilis strain N33]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |