Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | AB5991_RS06210 | Genome accession | NZ_CP163447 |
| Coordinates | 1196534..1197487 (+) | Length | 317 a.a. |
| NCBI ID | WP_014479436.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SD2 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1191534..1202487
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB5991_RS06180 (AB5991_06180) | argF | 1192076..1193035 (+) | 960 | WP_014479432.1 | ornithine carbamoyltransferase | - |
| AB5991_RS06190 (AB5991_06190) | yjzC | 1194411..1194590 (+) | 180 | WP_003245356.1 | YjzC family protein | - |
| AB5991_RS06195 (AB5991_06195) | yjzD | 1194636..1194821 (-) | 186 | WP_003245236.1 | YjzD family protein | - |
| AB5991_RS06200 (AB5991_06200) | - | 1195070..1195804 (+) | 735 | WP_014479433.1 | hypothetical protein | - |
| AB5991_RS06205 (AB5991_06205) | - | 1195886..1196443 (+) | 558 | WP_014479435.1 | hypothetical protein | - |
| AB5991_RS06210 (AB5991_06210) | med | 1196534..1197487 (+) | 954 | WP_014479436.1 | transcriptional regulator Med | Regulator |
| AB5991_RS06215 (AB5991_06215) | comZ | 1197502..1197693 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| AB5991_RS06220 (AB5991_06220) | yjzB | 1197723..1197950 (-) | 228 | WP_031600361.1 | spore coat protein YjzB | - |
| AB5991_RS06225 (AB5991_06225) | fabH | 1198115..1199053 (+) | 939 | WP_003232971.1 | beta-ketoacyl-ACP synthase III | - |
| AB5991_RS06230 (AB5991_06230) | fabF | 1199076..1200317 (+) | 1242 | WP_014479438.1 | beta-ketoacyl-ACP synthase II | - |
| AB5991_RS06235 (AB5991_06235) | yjaZ | 1200393..1201178 (+) | 786 | WP_014479439.1 | DUF2268 domain-containing protein | - |
| AB5991_RS06240 (AB5991_06240) | appD | 1201370..1202356 (+) | 987 | WP_003232965.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35310.88 Da Isoelectric Point: 4.6652
>NTDB_id=1029836 AB5991_RS06210 WP_014479436.1 1196534..1197487(+) (med) [Bacillus subtilis strain SD2]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=1029836 AB5991_RS06210 WP_014479436.1 1196534..1197487(+) (med) [Bacillus subtilis strain SD2]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
99.369 |
100 |
0.994 |