Detailed information NTG1029791

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB6A33_RS12170
• Genome accession: NZ_CP163446
• Coordinates: 2518564..2519178 (-)
• Length: 204 a.a.
• NCBI ID: WP_032873955.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Hao 2023
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2513564..2524178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6A33_RS12140 (AB6A33_12140)	rpsT	2513867..2514133 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
AB6A33_RS12145 (AB6A33_12145)	holA	2514150..2515191 (-)	1042	Protein_2344	DNA polymerase III subunit delta	-
AB6A33_RS12150 (AB6A33_12150)	-	2515231..2515382 (-)	152	Protein_2345	hypothetical protein	-
AB6A33_RS12155 (AB6A33_12155)	-	2515423..2515557 (+)	135	WP_003152870.1	YqzM family protein	-
AB6A33_RS12160 (AB6A33_12160)	comEC	2515576..2517927 (-)	2352	WP_032873958.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB6A33_RS12165 (AB6A33_12165)	-	2517928..2518497 (-)	570	WP_003152868.1	ComE operon protein 2	-
AB6A33_RS12170 (AB6A33_12170)	comEA	2518564..2519178 (-)	615	WP_032873955.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB6A33_RS12175 (AB6A33_12175)	comER	2519237..2520058 (+)	822	WP_012118027.1	late competence protein ComER	-
AB6A33_RS12180 (AB6A33_12180)	-	2520127..2520864 (-)	738	WP_032873951.1	class I SAM-dependent methyltransferase	-
AB6A33_RS12185 (AB6A33_12185)	rsfS	2520861..2521217 (-)	357	WP_007408260.1	ribosome silencing factor	-
AB6A33_RS12190 (AB6A33_12190)	yqeK	2521221..2521796 (-)	576	WP_032873949.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB6A33_RS12195 (AB6A33_12195)	-	2521786..2522355 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
AB6A33_RS12200 (AB6A33_12200)	yhbY	2522366..2522656 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
AB6A33_RS12205 (AB6A33_12205)	aroE	2522650..2523492 (-)	843	WP_032873946.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22265.47 Da
• Isoelectric Point: 6.4940

>NTDB_id=1029791 AB6A33_RS12170 WP_032873955.1 2518564..2519178(-) (comEA) [Bacillus velezensis strain Hao 2023]
MTKAMMTERLRRNLKILGACLVAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDLKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREEKGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1029791 AB6A33_RS12170 WP_032873955.1 2518564..2519178(-) (comEA) [Bacillus velezensis strain Hao 2023]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGTAGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGACGACAAGATTATGATTGATTTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACTCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAACGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CAGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAAAGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.115	93.627	0.544
comEA	Latilactobacillus sakei subsp. sakei 23K	31.897	100	0.363