Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BT141_RS13995 Genome accession   NZ_LT632614
Coordinates   3050153..3050944 (-) Length   263 a.a.
NCBI ID   WP_014844714.1    Uniprot ID   -
Organism   Legionella pneumophila strain ST62 isolate ST62     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3045153..3055944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BT141_RS13965 (H044120014_02776) legS1 3045286..3046443 (-) 1158 WP_015961696.1 Dot/Icm T4SS effector LegS1 -
  BT141_RS16275 (H044120014_02778) - 3046675..3047134 (+) 460 Protein_2697 hypothetical protein -
  BT141_RS13980 (H044120014_02779) - 3047160..3047453 (+) 294 WP_059428250.1 GIY-YIG nuclease family protein -
  BT141_RS13990 (H044120014_02780) dacB 3048268..3050061 (-) 1794 WP_027226717.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  BT141_RS13995 (H044120014_02781) spo0J 3050153..3050944 (-) 792 WP_014844714.1 ParB/RepB/Spo0J family partition protein Regulator
  BT141_RS14000 (H044120014_02782) ceg33 3051061..3051564 (-) 504 WP_014844715.1 Dot/Icm T4SS effector Ceg33 -
  BT141_RS14005 (H044120014_02783) - 3051737..3052486 (-) 750 WP_014842652.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  BT141_RS14010 (H044120014_02784) rsmB 3052483..3053766 (-) 1284 WP_042754694.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  BT141_RS14015 (H044120014_02785) fmt 3053763..3054707 (-) 945 WP_042754695.1 methionyl-tRNA formyltransferase -
  BT141_RS14020 (H044120014_02786) def 3054704..3055216 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30113.25 Da        Isoelectric Point: 5.7320

>NTDB_id=1029698 BT141_RS13995 WP_014844714.1 3050153..3050944(-) (spo0J) [Legionella pneumophila strain ST62 isolate ST62]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFG
HARVLVGLNPEQQEMFAHQIIGEEWSVRYLEQEIKSYKNKDTNSPKNPRKDRDIERLQTILAEQVGAPVQIVNDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1029698 BT141_RS13995 WP_014844714.1 3050153..3050944(-) (spo0J) [Legionella pneumophila strain ST62 isolate ST62]
ATGCAAACCCGATTTACTTATTTACCTGTTACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCCTTGGTGGTAAGACCTATAGCAAAAGAGC
GATATGAAATTATTGCGGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATCGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCAGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGTATTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAACAGCAAGAAATGTTTGCTCACCAGATTATTGGAGAGGAATGGTCTGT
CAGATACTTAGAGCAAGAAATTAAATCTTATAAAAATAAAGATACGAACAGTCCCAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCCTGGCTGAACAAGTGGGGGCTCCTGTACAAATTGTAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGATTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

37.692

98.859

0.373