Detailed information NTG1029633

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BV310_RS21805
• Genome accession: NZ_LT615378
• Coordinates: 4119904..4120929 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate 103
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4114904..4125929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV310_RS21775	zapB	4114988..4115233 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
BV310_RS21780	rraA	4115318..4115803 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BV310_RS21785	menA	4115896..4116822 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BV310_RS21790	hslU	4116889..4118220 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
BV310_RS21795	hslV	4118230..4118760 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BV310_RS21800	ftsN	4118853..4119812 (-)	960	WP_000068828.1	cell division protein FtsN	-
BV310_RS21805	cytR	4119904..4120929 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BV310_RS21810	priA	4121085..4123283 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
BV310_RS21815	rpmE	4123486..4123698 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
BV310_RS21820	yiiX	4123759..4124367 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
BV310_RS21825	metJ	4124551..4124868 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1029633 BV310_RS21805 WP_000644904.1 4119904..4120929(-) (cytR) [Escherichia coli isolate 103]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1029633 BV310_RS21805 WP_000644904.1 4119904..4120929(-) (cytR) [Escherichia coli isolate 103]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628