Detailed information NTG1029602

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AB5B06_RS15330
• Genome accession: NZ_CP163419
• Coordinates: 2294871..2296016 (-)
• Length: 381 a.a.
• NCBI ID: WP_416047524.1
• Uniprot ID: -
• Organism: Cupriavidus basilensis strain BL-MT-10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2289871..2301016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5B06_RS15310	-	2290886..2292205 (-)	1320	WP_416047521.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
AB5B06_RS15315	-	2292566..2293219 (-)	654	WP_416047522.1	ANTAR domain-containing response regulator	-
AB5B06_RS15320	-	2293428..2294129 (+)	702	WP_043343393.1	fumarylacetoacetate hydrolase family protein	-
AB5B06_RS15325	maiA	2294134..2294781 (+)	648	WP_416047523.1	maleylacetoacetate isomerase	-
AB5B06_RS15330	pilA	2294871..2296016 (-)	1146	WP_416047524.1	signal recognition particle-docking protein FtsY	Machinery gene
AB5B06_RS15335	-	2296077..2297603 (+)	1527	WP_416047525.1	M16 family metallopeptidase	-
AB5B06_RS15340	-	2297628..2298990 (+)	1363	Protein_2048	M16 family metallopeptidase	-
AB5B06_RS15345	rsmD	2299068..2299697 (+)	630	WP_416047526.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AB5B06_RS15350	coaD	2299915..2300403 (+)	489	WP_043343402.1	pantetheine-phosphate adenylyltransferase	-
AB5B06_RS15355	-	2300473..2300733 (+)	261	WP_150991846.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40213.43 Da
• Isoelectric Point: 6.8871

>NTDB_id=1029602 AB5B06_RS15330 WP_416047524.1 2294871..2296016(-) (pilA) [Cupriavidus basilensis strain BL-MT-10]
MFSFWKKRKAEPASAPPEVQSPAPAATPAAAPASAPPPIPAAGPAPAAVVPVPPTAALPVQSATPAAAEELVLTPPPAAS
AEAKRGWMQRLRTGLSKTSRNLGTLFVGVKVDEDLFEDLETALIMADAGVEATEHLLSALRRRVKTERIETAEGVKAALR
ELLTDLLRPLEKTMSLGREQPLVMMISGVNGAGKTTSIGKLCKHFQSYDQSVLLAAGDTFRAAAREQLTIWGERNNVTVV
SQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVIAKAMPNAPHESLLVIDANTGQNALSQVKA
FDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFADALLG

Nucleotide

• Length: 1146 bp

>NTDB_id=1029602 AB5B06_RS15330 WP_416047524.1 2294871..2296016(-) (pilA) [Cupriavidus basilensis strain BL-MT-10]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCCAGTGCGCCGCCCGAGGTGCAAAGCCCGGCGCCCGCCGCCAC
CCCGGCCGCGGCGCCCGCCAGCGCGCCACCCCCAATTCCTGCGGCCGGGCCTGCCCCGGCCGCCGTCGTTCCCGTCCCGC
CAACCGCCGCCCTGCCAGTCCAGAGCGCGACCCCGGCCGCTGCCGAGGAACTGGTCCTGACCCCGCCGCCGGCCGCCTCC
GCCGAGGCCAAGCGCGGCTGGATGCAGCGCTTGCGCACCGGCCTGTCCAAGACCAGCCGCAATCTGGGCACGCTGTTTGT
TGGCGTCAAGGTCGACGAAGACCTGTTCGAGGACCTGGAAACAGCCCTGATCATGGCCGACGCCGGCGTCGAGGCTACCG
AGCACCTGCTGAGCGCGCTGCGCCGCCGCGTCAAGACCGAACGCATCGAAACCGCCGAAGGCGTCAAGGCCGCGCTGCGC
GAGCTGCTGACCGACCTGCTGCGCCCGCTCGAGAAGACCATGTCTCTGGGCCGCGAGCAGCCGCTGGTGATGATGATCTC
GGGTGTGAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGAGCTATGACCAGTCCGTGCTGC
TGGCCGCGGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGACCATCTGGGGCGAGCGCAACAATGTCACCGTGGTC
TCGCAGGAAAGCGGCGACCCGGCGGCGGTGATCTTCGACGCGGTCAACGCGGCACGCGCACGCGGCATCGATATCGTGAT
GGCCGATACCGCGGGCCGCCTGCCCACACAGTTGCACCTGATGGAAGAGCTGAAGAAGGTCAAGCGTGTCATCGCCAAGG
CGATGCCGAACGCGCCACACGAATCGCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGTCCCAGGTCAAGGCG
TTCGACGACGCGCTGGGCCTGACCGGGCTGATCGTGACCAAGCTCGACGGCACCGCCAAGGGCGGCATCCTGGCCGCGAT
CGCGCGCCAGCGCCCGGTGCCGGTCTACTTCATCGGCGTGGGCGAGAAGGTCGAGGACCTGCAGCCCTTCAAGGCCGAGG
AATTCGCCGACGCACTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (105-161)

• SRP54-type protein, GTPase domain (SRP54) (182-381)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.125	100	0.58