Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | AB4X21_RS09475 | Genome accession | NZ_CP163380 |
| Coordinates | 1914841..1917270 (-) | Length | 809 a.a. |
| NCBI ID | WP_155172716.1 | Uniprot ID | - |
| Organism | Streptococcus sp. CP1998 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1909841..1922270
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4X21_RS09445 (AB4X21_09445) | - | 1910283..1911059 (-) | 777 | WP_369087911.1 | NUDIX domain-containing protein | - |
| AB4X21_RS09450 (AB4X21_09450) | pnuC | 1911060..1911842 (-) | 783 | WP_369087912.1 | nicotinamide riboside transporter PnuC | - |
| AB4X21_RS09455 (AB4X21_09455) | - | 1911853..1912914 (-) | 1062 | WP_369087913.1 | AAA family ATPase | - |
| AB4X21_RS09460 (AB4X21_09460) | - | 1913079..1913790 (-) | 712 | Protein_1818 | hypothetical protein | - |
| AB4X21_RS09465 (AB4X21_09465) | - | 1913958..1914365 (-) | 408 | WP_155172713.1 | DUF4430 domain-containing protein | - |
| AB4X21_RS09470 (AB4X21_09470) | - | 1914343..1914831 (-) | 489 | WP_155172714.1 | ECF transporter S component | - |
| AB4X21_RS09475 (AB4X21_09475) | clpC | 1914841..1917270 (-) | 2430 | WP_155172716.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| AB4X21_RS09480 (AB4X21_09480) | - | 1917271..1917735 (-) | 465 | WP_155172718.1 | CtsR family transcriptional regulator | - |
| AB4X21_RS09485 (AB4X21_09485) | - | 1918208..1920667 (-) | 2460 | Protein_1823 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89661.13 Da Isoelectric Point: 5.3476
>NTDB_id=1029448 AB4X21_RS09475 WP_155172716.1 1914841..1917270(-) (clpC) [Streptococcus sp. CP1998]
MNYSTALLESIEAAQILAGHYQGNTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGNTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=1029448 AB4X21_RS09475 WP_155172716.1 1914841..1917270(-) (clpC) [Streptococcus sp. CP1998]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGGCACTATCAGGGGAACACCTTAGA
TACTTGGCATCTCTTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATCACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAGCACGCAAGGGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTAGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCTCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGCCTTTATCGGGCCCAAAATCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACGGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGTCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAGGCAGGGGTCGGAAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGGGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAGATGCGTGTTCTTGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTTGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACACAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTTTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTACCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACTGTACAAAACCGAGATTCCAATGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCAAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGTTAGCCAAAGCT
TTGGCGGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCCAG
TCGCCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACCGTTGGCTTTGGTGCCAAAGATATTCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCTGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGGTACGATCCAGAAATGGGAGCTCGCCCACTCCGTCGTGTCTTGCAGA
CCGAAGTGGAGGATCAACTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGGCAAACGATCAAGGTTGGAACGACA
GCTGGAACGATCAAGTTTGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGGCACTATCAGGGGAACACCTTAGA
TACTTGGCATCTCTTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATCACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAGCACGCAAGGGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTAGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCTCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGCCTTTATCGGGCCCAAAATCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACGGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGTCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAGGCAGGGGTCGGAAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGGGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAGATGCGTGTTCTTGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTTGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACACAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTTTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTACCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACTGTACAAAACCGAGATTCCAATGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCAAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGTTAGCCAAAGCT
TTGGCGGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCCAG
TCGCCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACCGTTGGCTTTGGTGCCAAAGATATTCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCTGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGGTACGATCCAGAAATGGGAGCTCGCCCACTCCGTCGTGTCTTGCAGA
CCGAAGTGGAGGATCAACTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGGCAAACGATCAAGGTTGGAACGACA
GCTGGAACGATCAAGTTTGAGATTGTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae Rx1 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae D39 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus mutans UA159 |
66.218 |
100 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.742 |
100 |
0.651 |
| clpC | Streptococcus thermophilus LMD-9 |
64.742 |
100 |
0.651 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.318 |
99.011 |
0.449 |
| clpE | Streptococcus mutans UA159 |
47.687 |
77.503 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.763 |
80.222 |
0.367 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.625 |
79.11 |
0.361 |