Detailed information NTG1029447

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: AB4X21_RS09300
• Genome accession: NZ_CP163380
• Coordinates: 1872916..1874277 (-)
• Length: 453 a.a.
• NCBI ID: WP_369088382.1
• Uniprot ID: -
• Organism: Streptococcus sp. CP1998
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1867916..1879277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4X21_RS09295 (AB4X21_09295)	-	1872284..1872778 (-)	495	WP_003012833.1	carbonic anhydrase	-
AB4X21_RS09300 (AB4X21_09300)	radA	1872916..1874277 (-)	1362	WP_369088382.1	DNA repair protein RadA	Machinery gene
AB4X21_RS09305 (AB4X21_09305)	-	1874288..1874845 (-)	558	WP_320911123.1	histidine phosphatase family protein	-
AB4X21_RS09310 (AB4X21_09310)	-	1874805..1875251 (-)	447	WP_037608433.1	dUTP diphosphatase	-
AB4X21_RS09315 (AB4X21_09315)	-	1875660..1877594 (+)	1935	WP_369087892.1	Ig-like domain-containing protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49318.76 Da
• Isoelectric Point: 6.9518

>NTDB_id=1029447 AB4X21_RS09300 WP_369088382.1 1872916..1874277(-) (radA) [Streptococcus sp. CP1998]
MIAKKKTTFICQNCAYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLADVTSINVHRTKTEMEEFNR
VLGGGAVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEV
ERIQPNFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGE
RHHTFRILRAVKNRFGSTNEIGIFEMQSSGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNA
KRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEV
RRVNRIEQRINEAAKLGFTKIYVPKNSLTGITTPSGIQVVGVSTLAEVLKKVF

Nucleotide

• Length: 1362 bp

>NTDB_id=1029447 AB4X21_RS09300 WP_369088382.1 1872916..1874277(-) (radA) [Streptococcus sp. CP1998]
ATCATCGCAAAGAAAAAAACGACATTTATTTGTCAAAATTGTGCCTACAATTCACCCAAATACCTAGGGCGCTGTCCTAA
CTGTGGTTCTTGGTCTTCCTTTGTGGAGGAAGTCGAAGTTGCAGAAGTCAAAAATGCGCGTGTGTCCTTGACAGGTGAAA
AGACCAAACCCATGAAATTGGCGGACGTGACCTCTATCAATGTTCACCGGACCAAGACGGAGATGGAAGAATTCAACCGC
GTCCTTGGAGGTGGTGCCGTCCCAGGAAGTCTGGTCCTCATTGGGGGAGATCCTGGGATTGGGAAATCGACCCTGCTCCT
TCAAGTATCAACCCAGTTATCCCAAGTGGGAACAGTTCTTTACGTTAGTGGAGAGGAGTCGGCCCAGCAGATCAAACTTC
GGGCAGAGCGCTTGGGAGATATCGACAGTGAGTTTTATCTCTATGCTGAGACTAATATGCAGAGCGTGCGAGCAGAAGTG
GAGCGCATCCAGCCTAACTTCCTCATCATTGACTCGATCCAGACCATTATGTCTCCTGAGATTTCAGGGGTACAAGGATC
GGTTTCTCAGGTGCGTGAGGTAACGGCTGAGCTCATGCAACTGGCCAAGACCAATAACATCGCCATCTTTATCGTCGGTC
ATGTGACCAAGGAAGGAACCTTGGCGGGTCCTCGGATGCTGGAACACATGGTGGATACGGTGCTCTACTTTGAGGGCGAA
CGCCATCATACCTTCCGGATTCTAAGAGCAGTCAAGAACCGCTTTGGCTCGACCAATGAGATCGGGATCTTCGAGATGCA
GTCGAGTGGCTTGGTTGAGGTGCTCAATCCGAGTCAAGTTTTCCTAGAAGAGCGTTTAGACGGTGCCACTGGTTCGTCAA
TCGTAGTGACCATGGAGGGGACTCGTCCGATTCTTGCAGAAGTACAGGCCTTGGTGACACCAACTATGTTTGGAAATGCC
AAGCGGACGACGACAGGTCTTGATTTTAATCGGGCTAGTTTGATTATGGCTGTTTTGGAGAAACGTGCAGGTTTGCTCCT
CCAAAATCAGGATGCCTACCTCAAATCAGCAGGTGGTGTCAAATTGGATGAGCCTGCCATTGACCTGGCAGTAGCCGTAG
CCATTGCCTCGAGCTACAAGGACAAGCCAACCAACCCGCAGGAATGTTTCGTCGGAGAGTTGGGCTTGACAGGAGAAGTT
CGCCGGGTCAACCGGATCGAGCAACGAATCAATGAAGCTGCTAAACTTGGTTTTACCAAGATTTATGTTCCGAAAAATTC
TCTGACGGGGATCACGACACCATCAGGAATCCAGGTGGTCGGTGTGAGTACACTAGCTGAAGTCTTGAAGAAAGTATTTT
AA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (66-219)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (361-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis SK321	96.239	99.779	0.96
radA	Streptococcus pneumoniae Rx1	96.239	99.779	0.96
radA	Streptococcus pneumoniae D39	96.239	99.779	0.96
radA	Streptococcus pneumoniae R6	96.239	99.779	0.96
radA	Streptococcus pneumoniae TIGR4	96.239	99.779	0.96
radA	Streptococcus mitis NCTC 12261	96.018	99.779	0.958
radA	Bacillus subtilis subsp. subtilis str. 168	62.914	100	0.629