Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AB4X21_RS02760 Genome accession   NZ_CP163380
Coordinates   517603..518334 (+) Length   243 a.a.
NCBI ID   WP_003003794.1    Uniprot ID   A0AB39LEN2
Organism   Streptococcus sp. CP1998     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 512603..523334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4X21_RS02730 (AB4X21_02730) - 513012..514433 (+) 1422 WP_070464909.1 NCS2 family permease -
  AB4X21_RS02735 (AB4X21_02735) tsaE 514612..515067 (+) 456 WP_003012535.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AB4X21_RS02740 (AB4X21_02740) - 515060..515590 (+) 531 WP_003012634.1 GNAT family N-acetyltransferase -
  AB4X21_RS02745 (AB4X21_02745) - 515604..516797 (+) 1194 WP_155127756.1 LCP family protein -
  AB4X21_RS02750 (AB4X21_02750) - 516819..517109 (-) 291 WP_155127759.1 hypothetical protein -
  AB4X21_RS02755 (AB4X21_02755) - 517122..517535 (-) 414 WP_155127762.1 HIT family protein -
  AB4X21_RS02760 (AB4X21_02760) pptA 517603..518334 (+) 732 WP_003003794.1 ABC transporter ATP-binding protein Regulator
  AB4X21_RS02765 (AB4X21_02765) - 518331..519386 (+) 1056 WP_369088146.1 ABC transporter permease -
  AB4X21_RS02770 (AB4X21_02770) ccrZ 519427..520221 (+) 795 WP_003003852.1 cell cycle regulator CcrZ -
  AB4X21_RS02775 (AB4X21_02775) trmB 520218..520853 (+) 636 WP_369088147.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AB4X21_RS02780 (AB4X21_02780) rimP 520951..521430 (+) 480 WP_003003953.1 ribosome maturation factor RimP -
  AB4X21_RS02785 (AB4X21_02785) nusA 521475..522617 (+) 1143 WP_369088148.1 transcription termination factor NusA -
  AB4X21_RS02790 (AB4X21_02790) rnpM 522632..522928 (+) 297 WP_003003906.1 RNase P modulator RnpM -
  AB4X21_RS02795 (AB4X21_02795) - 522921..523220 (+) 300 WP_003003969.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26993.24 Da        Isoelectric Point: 4.4552

>NTDB_id=1029415 AB4X21_RS02760 WP_003003794.1 517603..518334(+) (pptA) [Streptococcus sp. CP1998]
MLEINKLTGGYVNIPVLKEVSFSVPDGQLIGLIGLNGAGKSTTINEIIGLLHPYAGEVRIDGLSLPEAPTEYRKKIGYIP
ETPSLYEELTLREHIETVAMAYDLDMDQVMVRVQPLLERFRLAEKLDWFPTQFSKGMKQKVMIICAYAVDPSLYIVDEPF
LGLDPVAIADLIQLLADEKAKGKSILMSTHVLDSAEKMCDGFVILHKGQIRAQGSLDELRSTFGDEKASLNDIYMTLTEE
ETA

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1029415 AB4X21_RS02760 WP_003003794.1 517603..518334(+) (pptA) [Streptococcus sp. CP1998]
ATGTTAGAAATCAACAAGTTGACAGGGGGCTATGTCAACATCCCTGTCCTGAAAGAGGTGAGTTTTTCAGTTCCGGATGG
CCAATTGATTGGTTTGATTGGACTAAATGGAGCTGGGAAGTCAACCACGATTAATGAAATTATTGGTCTGCTGCATCCTT
ATGCTGGGGAAGTACGGATTGACGGCCTAAGTTTGCCAGAAGCTCCAACGGAATACCGCAAGAAAATTGGTTATATTCCA
GAAACCCCTAGTCTATATGAAGAATTAACCTTGCGAGAGCATATCGAGACCGTAGCTATGGCCTATGATTTAGACATGGA
TCAAGTCATGGTGCGCGTCCAGCCTTTGTTGGAACGATTCCGTTTGGCTGAAAAATTAGATTGGTTCCCTACCCAGTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGCGCCTATGCAGTGGATCCAAGTCTTTATATTGTCGATGAACCCTTT
TTGGGATTGGATCCTGTTGCGATTGCAGATTTGATTCAGTTATTGGCAGATGAGAAAGCAAAAGGAAAATCGATTTTGAT
GAGTACCCACGTTCTTGATTCGGCTGAAAAGATGTGTGATGGTTTTGTGATCCTCCATAAGGGTCAAATCCGAGCACAAG
GGAGCCTGGATGAGTTGCGTTCAACTTTTGGGGATGAGAAAGCAAGTCTAAATGATATCTACATGACCTTGACAGAAGAG
GAAACAGCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.519

99.177

0.749
  pptA Streptococcus thermophilus LMD-9

75.519

99.177

0.749

Multiple sequence alignment