Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   B5474_RS13610 Genome accession   NZ_LT605059
Coordinates   2838927..2839868 (-) Length   313 a.a.
NCBI ID   WP_079548855.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain NCTC7364     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2833927..2844868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5474_RS13595 (NCTC7364_02729) bauB 2836238..2837206 (-) 969 WP_079548853.1 siderophore-binding periplasmic lipoprotein BauB -
  B5474_RS13600 (NCTC7364_02730) bauE 2837213..2837983 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  B5474_RS13605 (NCTC7364_02731) bauC 2837980..2838927 (-) 948 WP_079548854.1 ferric acinetobactin ABC transporter permease subunit BauC -
  B5474_RS13610 (NCTC7364_02732) ceuB 2838927..2839868 (-) 942 WP_079548855.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  B5474_RS20455 (NCTC7364_02733) - 2839868..2839999 (-) 132 WP_001218004.1 hypothetical protein -
  B5474_RS13615 (NCTC7364_02734) basB 2840500..2842530 (+) 2031 WP_150123707.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  B5474_RS13620 (NCTC7364_02735) basA 2842600..2844447 (-) 1848 WP_079548857.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34009.12 Da        Isoelectric Point: 8.6941

>NTDB_id=1029263 B5474_RS13610 WP_079548855.1 2838927..2839868(-) (ceuB) [Acinetobacter baumannii strain NCTC7364]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRVRFRNMVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=1029263 B5474_RS13610 WP_079548855.1 2838927..2839868(-) (ceuB) [Acinetobacter baumannii strain NCTC7364]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTCA
CCGGTATTGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCTTTAACTTTAGTTCCGGTAACCAGCACGCTGAGTAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGGCGGGTCCGTTTTAGAAATATGGTTTTAG
TACCGGTTATTGGCTTGATGTATGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTTCTGACTTATCTTTTCGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTTA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACTGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAGAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGAGCGTCTCTATTACTGGTTTGCGACATTCTTGGTCGTTCAATTATTTATCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419