Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NST54_RS11805 | Genome accession | NZ_CP163264 |
| Coordinates | 2371666..2372751 (+) | Length | 361 a.a. |
| NCBI ID | WP_034771006.1 | Uniprot ID | A0A090IWD5 |
| Organism | Caldifermentibacillus hisashii strain FSL K6-0152 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2366666..2377751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST54_RS11780 (NST54_11780) | - | 2367487..2369181 (+) | 1695 | WP_341288152.1 | SNF2-related protein | - |
| NST54_RS11785 (NST54_11785) | - | 2369150..2369953 (+) | 804 | WP_041846287.1 | YqhG family protein | - |
| NST54_RS11790 (NST54_11790) | - | 2370131..2370301 (-) | 171 | WP_034770998.1 | DUF2759 domain-containing protein | - |
| NST54_RS11795 (NST54_11795) | - | 2370372..2370614 (-) | 243 | WP_041846286.1 | DUF2626 domain-containing protein | - |
| NST54_RS11800 (NST54_11800) | - | 2370754..2371455 (-) | 702 | WP_341288153.1 | helix-turn-helix domain-containing protein | - |
| NST54_RS11805 (NST54_11805) | comGA | 2371666..2372751 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NST54_RS11810 (NST54_11810) | comGB | 2372726..2373757 (+) | 1032 | WP_368985305.1 | competence type IV pilus assembly protein ComGB | - |
| NST54_RS11815 (NST54_11815) | comGC | 2373784..2374083 (+) | 300 | WP_041903955.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NST54_RS11820 (NST54_11820) | comGD | 2374058..2374561 (+) | 504 | WP_368985306.1 | competence type IV pilus minor pilin ComGD | - |
| NST54_RS11825 (NST54_11825) | - | 2374536..2374892 (+) | 357 | WP_368985307.1 | hypothetical protein | - |
| NST54_RS11830 (NST54_11830) | comGF | 2374864..2375328 (+) | 465 | WP_251241411.1 | competence type IV pilus minor pilin ComGF | - |
| NST54_RS11835 (NST54_11835) | comGG | 2375219..2375749 (+) | 531 | WP_368985308.1 | competence type IV pilus minor pilin ComGG | - |
| NST54_RS11840 (NST54_11840) | - | 2375850..2376035 (+) | 186 | WP_034771024.1 | YqzE family protein | - |
| NST54_RS11845 (NST54_11845) | - | 2376066..2377190 (-) | 1125 | WP_368985309.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40615.22 Da Isoelectric Point: 7.5768
>NTDB_id=1029098 NST54_RS11805 WP_034771006.1 2371666..2372751(+) (comGA) [Caldifermentibacillus hisashii strain FSL K6-0152]
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
Nucleotide
Download Length: 1086 bp
>NTDB_id=1029098 NST54_RS11805 WP_034771006.1 2371666..2372751(+) (comGA) [Caldifermentibacillus hisashii strain FSL K6-0152]
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCATCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTGGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
AATATTACCACAAGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCACATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
GGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCCGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTCTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAAACAAAGTCGCTGGAAAATTGA
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCATCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTGGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
AATATTACCACAAGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCACATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
GGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCCGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTCTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAAACAAAGTCGCTGGAAAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.695 |
97.23 |
0.551 |