Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ45_RS11620 | Genome accession | NZ_CP163263 |
| Coordinates | 2418334..2419419 (+) | Length | 361 a.a. |
| NCBI ID | WP_034771006.1 | Uniprot ID | A0A090IWD5 |
| Organism | Caldifermentibacillus hisashii strain FSL K6-2747 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2413334..2424419
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ45_RS11595 (NSQ45_11595) | - | 2413793..2415487 (+) | 1695 | WP_368993193.1 | DEAD/DEAH box helicase | - |
| NSQ45_RS11600 (NSQ45_11600) | - | 2415456..2416259 (+) | 804 | WP_108898278.1 | YqhG family protein | - |
| NSQ45_RS11605 (NSQ45_11605) | - | 2416800..2416970 (-) | 171 | WP_368993195.1 | DUF2759 family protein | - |
| NSQ45_RS11610 (NSQ45_11610) | - | 2417041..2417283 (-) | 243 | WP_034771001.1 | DUF2626 domain-containing protein | - |
| NSQ45_RS11615 (NSQ45_11615) | - | 2417422..2418123 (-) | 702 | WP_368993198.1 | helix-turn-helix transcriptional regulator | - |
| NSQ45_RS11620 (NSQ45_11620) | comGA | 2418334..2419419 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ45_RS11625 (NSQ45_11625) | comGB | 2419394..2420425 (+) | 1032 | WP_034771008.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ45_RS11630 (NSQ45_11630) | comGC | 2420452..2420751 (+) | 300 | WP_041846282.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ45_RS11635 (NSQ45_11635) | comGD | 2420726..2421229 (+) | 504 | WP_251241409.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ45_RS11640 (NSQ45_11640) | - | 2421204..2421560 (+) | 357 | WP_251241410.1 | hypothetical protein | - |
| NSQ45_RS11645 (NSQ45_11645) | comGF | 2421532..2421996 (+) | 465 | WP_251241411.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ45_RS11650 (NSQ45_11650) | comGG | 2421887..2422417 (+) | 531 | WP_341288155.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ45_RS11655 (NSQ45_11655) | - | 2422518..2422703 (+) | 186 | WP_034771024.1 | YqzE family protein | - |
| NSQ45_RS11660 (NSQ45_11660) | - | 2422734..2423858 (-) | 1125 | WP_341288156.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40615.22 Da Isoelectric Point: 7.5768
>NTDB_id=1029052 NSQ45_RS11620 WP_034771006.1 2418334..2419419(+) (comGA) [Caldifermentibacillus hisashii strain FSL K6-2747]
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
MPNSIETRAREILEHALSLHATDIHIIPKSKHASVLFRLSHKLIPIMTIELEETERLISYMKFQAAMDIGEKRKPQNGSF
QIDIGGLSVGLRLSTLPSIFAESLVIRILPQESYIPFQQLSLFPKSLRLLLAMLKFSHGLIIFTGPTGSGKTTTLYSLLQ
HSTKSLGRNVITLEDPVEKNSEDLLQVQVNEKAGITYNTGLKAILRHDPDIIMVGEIRDSETAHIAIRAALTGHLVLTTM
HTKDSKGALYRLIEFGVNWHEIEQTLVAVTAQRLVELICPYCLEEECPVYCNQNKNKRTAVYEILYGRALKEALLEMKGE
AFSARYPTLGQLIAKGIALGFIKKSEYERWVHDIETKSLEN
Nucleotide
Download Length: 1086 bp
>NTDB_id=1029052 NSQ45_RS11620 WP_034771006.1 2418334..2419419(+) (comGA) [Caldifermentibacillus hisashii strain FSL K6-2747]
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCTTCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTGGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
TATATTACCACAGGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCGCATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
AGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCTGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTTTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAGACAAAGTCGCTGGAAAATTGA
TTGCCGAACTCGATTGAAACACGGGCAAGGGAAATTTTGGAGCACGCCCTTTCTTTACATGCAACAGATATTCATATCAT
CCCCAAATCAAAACATGCTTCCGTTCTATTTCGATTGTCTCATAAACTCATCCCCATAATGACAATCGAACTGGAGGAAA
CGGAAAGATTAATTTCATATATGAAGTTTCAGGCAGCAATGGATATCGGCGAAAAAAGAAAACCCCAGAACGGTTCTTTT
CAAATAGATATCGGGGGGCTATCTGTCGGACTTCGATTATCCACTTTGCCTTCCATATTCGCTGAAAGTTTGGTCATCCG
TATATTACCACAGGAATCATACATCCCATTTCAACAATTATCCTTATTCCCAAAATCACTGAGACTACTGTTAGCCATGT
TAAAGTTTTCCCACGGTTTAATCATATTTACAGGACCAACCGGATCGGGCAAAACAACAACTTTATATTCTCTTCTCCAA
CATTCGACAAAATCTCTTGGCAGGAATGTCATCACCTTGGAAGATCCTGTTGAAAAAAATAGTGAAGATTTACTTCAAGT
TCAAGTAAATGAAAAAGCCGGCATTACGTATAATACCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATTATTATGG
TCGGCGAAATTCGTGATAGTGAGACAGCGCATATTGCCATTCGAGCAGCATTAACCGGTCATTTAGTATTGACAACGATG
CATACGAAAGATTCAAAAGGTGCATTGTACCGGTTAATCGAATTTGGTGTTAATTGGCATGAAATTGAACAAACTTTGGT
AGCAGTGACGGCCCAAAGATTAGTCGAATTAATTTGTCCTTACTGTTTAGAAGAAGAATGTCCTGTCTATTGCAACCAGA
ATAAAAATAAGCGTACTGCCGTTTATGAAATTTTGTACGGTCGTGCATTAAAGGAAGCACTGTTGGAAATGAAGGGTGAA
GCATTTTCGGCGCGCTATCCGACTTTGGGCCAATTGATTGCAAAAGGTATTGCTCTCGGATTTATCAAGAAAAGTGAGTA
TGAAAGATGGGTGCATGATATTGAGACAAAGTCGCTGGAAAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.695 |
97.23 |
0.551 |