Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | AB4O66_RS09325 | Genome accession | NZ_CP163132 |
| Coordinates | 1946110..1946739 (+) | Length | 209 a.a. |
| NCBI ID | WP_000839133.1 | Uniprot ID | A0A1M2IUY6 |
| Organism | Escherichia coli strain W4 isolate China:Kunming | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1941110..1951739
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4O66_RS09305 (AB4O66_09305) | ycbZ | 1941498..1943258 (-) | 1761 | WP_000156477.1 | Lon protease family protein | - |
| AB4O66_RS09310 (AB4O66_09310) | matP | 1943444..1943896 (+) | 453 | WP_000877161.1 | macrodomain Ter protein MatP | - |
| AB4O66_RS09315 (AB4O66_09315) | ompA | 1943974..1945026 (-) | 1053 | WP_001346420.1 | porin OmpA | - |
| AB4O66_RS09320 (AB4O66_09320) | sulA | 1945383..1945892 (-) | 510 | WP_000288691.1 | SOS-induced cell division inhibitor SulA | - |
| AB4O66_RS09325 (AB4O66_09325) | sxy/tfoX | 1946110..1946739 (+) | 630 | WP_000839133.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| AB4O66_RS09330 (AB4O66_09330) | yccS | 1946702..1948864 (-) | 2163 | WP_000875039.1 | YccS family putative transporter | - |
| AB4O66_RS09335 (AB4O66_09335) | yccF | 1948874..1949320 (-) | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| AB4O66_RS09340 (AB4O66_09340) | helD | 1949443..1951497 (+) | 2055 | WP_001361412.1 | DNA helicase IV | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24161.04 Da Isoelectric Point: 9.2180
>NTDB_id=1028925 AB4O66_RS09325 WP_000839133.1 1946110..1946739(+) (sxy/tfoX) [Escherichia coli strain W4 isolate China:Kunming]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTIDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTIDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=1028925 AB4O66_RS09325 WP_000839133.1 1946110..1946739(+) (sxy/tfoX) [Escherichia coli strain W4 isolate China:Kunming]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCATTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAC
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTAGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCATTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAC
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTAGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.522 |
100 |
0.995 |