Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AB4O81_RS07945 Genome accession   NZ_CP163090
Coordinates   1652388..1653014 (+) Length   208 a.a.
NCBI ID   WP_045350157.1    Uniprot ID   -
Organism   Enterobacter hormaechei strain W73     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1647388..1658014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4O81_RS07925 (AB4O81_07925) - 1647787..1649547 (-) 1761 WP_032608967.1 Lon protease family protein -
  AB4O81_RS07930 (AB4O81_07930) matP 1649734..1650186 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  AB4O81_RS07935 (AB4O81_07935) ompA 1650252..1651304 (-) 1053 WP_017694761.1 porin OmpA -
  AB4O81_RS07940 (AB4O81_07940) sulA 1651661..1652170 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  AB4O81_RS07945 (AB4O81_07945) sxy/tfoX 1652388..1653014 (+) 627 WP_045350157.1 TfoX/Sxy family DNA transformation protein Regulator
  AB4O81_RS07950 (AB4O81_07950) yccS 1652971..1655133 (-) 2163 WP_045345689.1 YccS family putative transporter -
  AB4O81_RS07955 (AB4O81_07955) - 1655152..1655598 (-) 447 WP_003858149.1 YccF domain-containing protein -
  AB4O81_RS07960 (AB4O81_07960) helD 1655721..1657775 (+) 2055 WP_045345690.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24014.62 Da        Isoelectric Point: 9.4592

>NTDB_id=1028740 AB4O81_RS07945 WP_045350157.1 1652388..1653014(+) (sxy/tfoX) [Enterobacter hormaechei strain W73]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYILAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1028740 AB4O81_RS07945 WP_045350157.1 1652388..1653014(+) (sxy/tfoX) [Enterobacter hormaechei strain W73]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATATCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment