Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AB4O82_RS07645 Genome accession   NZ_CP163086
Coordinates   1625411..1626037 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain W76     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1620411..1631037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4O82_RS07625 (AB4O82_07625) - 1620810..1622570 (-) 1761 WP_276170352.1 Lon protease family protein -
  AB4O82_RS07630 (AB4O82_07630) matP 1622757..1623209 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  AB4O82_RS07635 (AB4O82_07635) ompA 1623275..1624327 (-) 1053 WP_276170353.1 porin OmpA -
  AB4O82_RS07640 (AB4O82_07640) sulA 1624684..1625193 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  AB4O82_RS07645 (AB4O82_07645) sxy/tfoX 1625411..1626037 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  AB4O82_RS07650 (AB4O82_07650) yccS 1625994..1628156 (-) 2163 WP_105322613.1 YccS family putative transporter -
  AB4O82_RS07655 (AB4O82_07655) - 1628175..1628621 (-) 447 WP_023299745.1 YccF domain-containing protein -
  AB4O82_RS07660 (AB4O82_07660) helD 1628744..1630798 (+) 2055 WP_276170354.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=1028718 AB4O82_RS07645 WP_023299743.1 1625411..1626037(+) (sxy/tfoX) [Enterobacter hormaechei strain W76]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1028718 AB4O82_RS07645 WP_023299743.1 1625411..1626037(+) (sxy/tfoX) [Enterobacter hormaechei strain W76]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment