Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   AB4O95_RS08170 Genome accession   NZ_CP163007
Coordinates   1730849..1731475 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter asburiae strain W207     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1725849..1736475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4O95_RS08150 (AB4O95_08150) - 1726249..1728009 (-) 1761 WP_094934908.1 Lon protease family protein -
  AB4O95_RS08155 (AB4O95_08155) matP 1728196..1728648 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  AB4O95_RS08160 (AB4O95_08160) ompA 1728712..1729767 (-) 1056 WP_023311028.1 porin OmpA -
  AB4O95_RS08165 (AB4O95_08165) sulA 1730122..1730631 (-) 510 WP_368982370.1 SOS-induced cell division inhibitor SulA -
  AB4O95_RS08170 (AB4O95_08170) sxy/tfoX 1730849..1731475 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  AB4O95_RS08175 (AB4O95_08175) yccS 1731432..1733594 (-) 2163 WP_094934909.1 YccS family putative transporter -
  AB4O95_RS08180 (AB4O95_08180) - 1733614..1734060 (-) 447 WP_023311032.1 YccF domain-containing protein -
  AB4O95_RS08185 (AB4O95_08185) helD 1734184..1736238 (+) 2055 WP_094934910.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=1028422 AB4O95_RS08170 WP_033145121.1 1730849..1731475(+) (sxy/tfoX) [Enterobacter asburiae strain W207]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1028422 AB4O95_RS08170 WP_033145121.1 1730849..1731475(+) (sxy/tfoX) [Enterobacter asburiae strain W207]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment