Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB4922_RS06785 Genome accession   NZ_CP162911
Coordinates   1329947..1330528 (+) Length   193 a.a.
NCBI ID   WP_017367156.1    Uniprot ID   A0AB39J8T9
Organism   Bacillus aerius strain KW1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1324947..1335528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4922_RS06760 (AB4922_06760) - 1325611..1326789 (+) 1179 WP_368775026.1 N-acetyldiaminopimelate deacetylase -
  AB4922_RS06765 (AB4922_06765) - 1326840..1327082 (+) 243 WP_003211408.1 YkuS family protein -
  AB4922_RS06770 (AB4922_06770) - 1327107..1327916 (-) 810 WP_035392203.1 mechanosensitive ion channel family protein -
  AB4922_RS06775 (AB4922_06775) ahpA 1328188..1328730 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  AB4922_RS06780 (AB4922_06780) - 1329007..1329465 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  AB4922_RS06785 (AB4922_06785) rok 1329947..1330528 (+) 582 WP_017367156.1 hypothetical protein Regulator
  AB4922_RS06790 (AB4922_06790) - 1330591..1331508 (-) 918 WP_368775027.1 sigmaE regulated sporulation protein -
  AB4922_RS06795 (AB4922_06795) - 1331592..1332173 (+) 582 WP_368775028.1 molybdenum cofactor guanylyltransferase -
  AB4922_RS06800 (AB4922_06800) - 1332203..1333219 (+) 1017 WP_060832295.1 ThiF family adenylyltransferase -
  AB4922_RS06805 (AB4922_06805) glp 1333229..1334503 (+) 1275 WP_060832296.1 gephyrin-like molybdotransferase Glp -
  AB4922_RS06810 (AB4922_06810) mobB 1334485..1335012 (+) 528 WP_060832826.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AB4922_RS06815 (AB4922_06815) - 1335005..1335496 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=1028023 AB4922_RS06785 WP_017367156.1 1329947..1330528(+) (rok) [Bacillus aerius strain KW1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1028023 AB4922_RS06785 WP_017367156.1 1329947..1330528(+) (rok) [Bacillus aerius strain KW1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACCAGCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGTTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

80

98.446

0.788

Multiple sequence alignment