Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB4922_RS05470 Genome accession   NZ_CP162911
Coordinates   1090238..1090435 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus aerius strain KW1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1085238..1095435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4922_RS05440 (AB4922_05440) - 1085638..1085817 (+) 180 WP_008348517.1 YjzC family protein -
  AB4922_RS05445 (AB4922_05445) - 1085987..1087252 (+) 1266 WP_368774985.1 MFS transporter -
  AB4922_RS05450 (AB4922_05450) - 1087372..1087566 (-) 195 WP_008348514.1 YjzD family protein -
  AB4922_RS05455 (AB4922_05455) - 1087779..1088519 (+) 741 WP_007499048.1 hypothetical protein -
  AB4922_RS05460 (AB4922_05460) - 1088595..1089170 (+) 576 WP_065460142.1 nad binding enzyme -
  AB4922_RS05465 (AB4922_05465) med 1089261..1090226 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  AB4922_RS05470 (AB4922_05470) comZ 1090238..1090435 (+) 198 WP_008348507.1 ComZ family protein Regulator
  AB4922_RS05475 (AB4922_05475) - 1090639..1090872 (-) 234 WP_008348506.1 hypothetical protein -
  AB4922_RS05480 (AB4922_05480) - 1091042..1091980 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  AB4922_RS05485 (AB4922_05485) fabF 1092002..1093243 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  AB4922_RS05490 (AB4922_05490) - 1093321..1094115 (+) 795 WP_017360172.1 DUF2268 domain-containing protein -
  AB4922_RS05495 (AB4922_05495) - 1094286..1095281 (+) 996 WP_065460146.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=1028014 AB4922_RS05470 WP_008348507.1 1090238..1090435(+) (comZ) [Bacillus aerius strain KW1]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=1028014 AB4922_RS05470 WP_008348507.1 1090238..1090435(+) (comZ) [Bacillus aerius strain KW1]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment