Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB4922_RS05085 Genome accession   NZ_CP162911
Coordinates   1008571..1009521 (+) Length   316 a.a.
NCBI ID   WP_035700170.1    Uniprot ID   A0AB39J2K1
Organism   Bacillus aerius strain KW1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1003571..1014521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4922_RS05065 (AB4922_05065) - 1004806..1005288 (+) 483 WP_025207098.1 hypothetical protein -
  AB4922_RS05070 (AB4922_05070) - 1005319..1006758 (-) 1440 WP_025207099.1 PLP-dependent aminotransferase family protein -
  AB4922_RS05075 (AB4922_05075) - 1006902..1008071 (+) 1170 WP_035700168.1 MFS transporter -
  AB4922_RS05080 (AB4922_05080) - 1008134..1008412 (+) 279 WP_025207101.1 barstar family protein -
  AB4922_RS05085 (AB4922_05085) ceuB 1008571..1009521 (+) 951 WP_035700170.1 ABC transporter permease Machinery gene
  AB4922_RS05090 (AB4922_05090) - 1009514..1010464 (+) 951 WP_008348643.1 iron chelate uptake ABC transporter family permease subunit -
  AB4922_RS05095 (AB4922_05095) - 1010455..1011213 (+) 759 WP_057079732.1 ABC transporter ATP-binding protein -
  AB4922_RS05100 (AB4922_05100) - 1011236..1012180 (+) 945 WP_331832635.1 siderophore ABC transporter substrate-binding protein -
  AB4922_RS05105 (AB4922_05105) - 1012319..1013275 (+) 957 WP_007499147.1 LCP family protein -
  AB4922_RS05110 (AB4922_05110) - 1013312..1013746 (-) 435 WP_035700181.1 hypothetical protein -
  AB4922_RS05115 (AB4922_05115) - 1013832..1014194 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=1028010 AB4922_RS05085 WP_035700170.1 1008571..1009521(+) (ceuB) [Bacillus aerius strain KW1]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTLLTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1028010 AB4922_RS05085 WP_035700170.1 1008571..1009521(+) (ceuB) [Bacillus aerius strain KW1]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGCTTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.667

94.937

0.491

Multiple sequence alignment