Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AW03_RS17205 Genome accession   NZ_CP007173
Coordinates   3342904..3343617 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis HJ5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3337904..3348617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW03_RS17185 (AW03_033050) ghrB 3338049..3339026 (+) 978 WP_080030695.1 D-glycerate dehydrogenase -
  AW03_RS17190 (AW03_033060) psdB 3339063..3341003 (-) 1941 WP_015483744.1 lantibiotic ABC transporter permease PsdB -
  AW03_RS17195 (AW03_033070) psdA 3340978..3341757 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  AW03_RS17200 (AW03_033080) psdS 3341840..3342910 (-) 1071 WP_015483745.1 two-component sensor histidine kinase PsdS -
  AW03_RS17205 (AW03_033090) braR 3342904..3343617 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  AW03_RS17210 (AW03_033100) yvzJ 3343764..3343973 (+) 210 WP_003243327.1 lipoprotein -
  AW03_RS17215 (AW03_033110) yvcN 3344009..3344773 (-) 765 WP_015384739.1 arylamine N-acetyltransferase -
  AW03_RS17220 (AW03_033120) crh 3344774..3345031 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  AW03_RS17225 (AW03_033130) whiA 3345055..3346005 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  AW03_RS17230 (AW03_033140) mgfK 3346028..3346981 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  AW03_RS17235 (AW03_033150) rapZ 3346983..3347870 (-) 888 WP_003243903.1 RNase adapter RapZ -
  AW03_RS17240 (AW03_033160) rppI 3347895..3348371 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=102801 AW03_RS17205 WP_015384738.1 3342904..3343617(-) (braR) [Bacillus subtilis HJ5]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=102801 AW03_RS17205 WP_015384738.1 3342904..3343617(-) (braR) [Bacillus subtilis HJ5]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTGGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment