Detailed information NTG1027958

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AB4L27_RS06375
• Genome accession: NZ_CP162907
• Coordinates: 1373871..1377257 (+)
• Length: 1128 a.a.
• NCBI ID: WP_139060599.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain 3098
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1368871..1382257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4L27_RS06355 (AB4L27_06355)	erpA	1369228..1369569 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
AB4L27_RS06360 (AB4L27_06360)	hemL	1369816..1371111 (+)	1296	WP_012841437.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AB4L27_RS06365 (AB4L27_06365)	-	1371458..1372543 (+)	1086	WP_006743285.1	AI-2E family transporter	-
AB4L27_RS06370 (AB4L27_06370)	rsmC	1372619..1373644 (+)	1026	WP_085342663.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AB4L27_RS06375 (AB4L27_06375)	chiS	1373871..1377257 (+)	3387	WP_139060599.1	response regulator	Regulator
AB4L27_RS06380 (AB4L27_06380)	-	1378035..1379717 (+)	1683	WP_005394703.1	ABC transporter substrate-binding protein	-
AB4L27_RS06385 (AB4L27_06385)	-	1379888..1380874 (+)	987	WP_005394705.1	ABC transporter permease	-
AB4L27_RS06390 (AB4L27_06390)	-	1380877..1381902 (+)	1026	WP_005394707.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127041.60 Da
• Isoelectric Point: 5.4346

>NTDB_id=1027958 AB4L27_RS06375 WP_139060599.1 1373871..1377257(+) (chiS) [Vibrio diabolicus strain 3098]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
FIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDD
TTFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQTTQTLAAHGHFQIPEIDVENNEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASQAEMRHMENKILESELRQRAAVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRNLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREILVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1027958 AB4L27_RS06375 WP_139060599.1 1373871..1377257(+) (chiS) [Vibrio diabolicus strain 3098]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACTATTACTGCGATTTTTTTCCTACAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACACTTGTTGT
CTGTTCGAGATACAAAACAACAGCAAATTATCGACTACTTTGAGGCGCGGGAAACCGAAGTCATGGGCTTTGTGCGCTCT
GAACTGGCTTACGCCAGTGGTGGTCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGCAATGACATTGAAGAATC
TCGTAAAAATGCCCAACAGCGCTACATTGAAGGCAGCGGAGATCAAATCAAAACGTCAACGTTACCCGAGTCTTCCAACT
ATGTCGGAAGTGAACGTTACCGACTCTTACATAAACGTTACCACTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGATATTTTGCTGGTCGATATCAACGGTAATGTCACCTACTCGATCAACAAAGACGATAACTACGGAACAAACTTATT
ATCAGGCCCCTACAAAGACTCAGCACTTGGCAAAACCTTCAAGCGTCTAGCTGATGACGTCACTGAACGCCGTAAGGTGA
ATGAAGACTACACCCCTGTGATTGTGTCTGACTTCGAACTGGAAGGTGGTAAACAAGTCGCTTGGTTAGGTGCTCCAATT
GTTCAGCAAGGCTACCTACACAGCTATGCTATGTTCCGCTTACCAAATAATGGCATCACGAAGTTAGCCGCAGACGCCAA
CCGAGAGTCATCCATTAACACCTTACTGGTTGGAAATGATCACCAACCTCGCACAATTAACACCAAGCAAGATGACATTA
AGAACAGCTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGCGTCGGCACTTACACGAACGGTTTAGGTGAAGAG
TTCATCGCTGCTTATGCACCGATTGAAACGCGTGGTGTTATTTGGGCACTCGTCGTGCAATTACCTGAAAACGAAGCTTT
CGCTCGTATTCATCAACTCGAAAAACTGTTTGTTATCGCCATGCTGATCGCCATCATTCTAGTGGTAATCGCTTCCCATT
ATTTATCAAACTTTATTACTTCTCCGTTGCTGAAGTTAACTTGGGCTGCCGAAAAAGTGTCTGCCGGAGATCTTGATGAC
ACCACCTTTAATACGGTTCGCAAAGATGAAATTGGCCGTCTTGCGCTGAGTTTTGAACGAATGCAACGCTCTATTCGAGA
GAAAATTCAAACCATTAAGAAGCAAAATGAAGAGCTCGAGAGCAACATCCAGATCATTCAAAAACAAAATGATGAACTGC
AATTGGCCGACAAACTTAAAGATGAGTTCTTAGCCACCACTTCTCATGAACTCCGCACACCATTGCACGGCATGGTCGGA
ATCGCTGAGACTTTAGCGTCCGGCGCTAACGGTGCTATCCCTGCTAGCCAAAAATATCAGCTTGATATCATCATTAAAAG
TGGGCAACGTCTCGCAAACCTTGTTGATGACTTATTGGATTATCATAAAATGCGTTACGGAAGCATGGATATCCAGAAGT
CAGCGGTGAGTTTAGCCAGTGCAACGCGACTGGTACTAGAGCTTTCCAGTCATTTACTCGGAAATAAAACCATCCGTATC
ATCAACCAAGTACCAGCGGATTTGAAAGCGGTGTCTGCCGATCCTCAACGCCTTGAACAAGTGTTATATAACCTGATCGG
TAATGCGATTAAGTACACCTCAGAAGGTAAAATCGTTATCTCCGCCAATGTGGTTGATGATCATGTTCGTGTGCAAGTTG
TGGATACTGGGCAAGGTATTCCAGCAGAACATCTTGAACATATTTTCGAACCACTTATCCAAGCGGGACAAGACGCAAGT
CGCTATCGTCAAGGTGCGGGGCTCGGGCTTTCGATTAGCCGTCAATTGATTGAGTTGATGGGTGGCTCGTTATACGTCAG
CAGCCAGCCTATGGTCGGCACCACCTTCAGTTTCACGTTACCACTTGCCAGTGAAGAAGAGATCCAAACAACTCAAACCC
TTGCAGCGCACGGACACTTCCAGATTCCTGAAATCGATGTAGAGAACAATGAAGACTTATCACTGCCAGAGAATCCAGAC
GGCCCGTTACTGTATGTCGCTGACGATGAGCCAGTAAACCTGCGTGTGCTTGAGAGCTTCTTACGTTTAGAGGGCTATCG
CGTACGTACCGTCTCTGATGGACCAGAAACATTAGCACTCGTTGAGCAGGAAAAACCGGAACTCCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTCTGCAGTGAATTACGTGAAACTTATGACCATGCCGAGCTACCTATCATTATG
CTCACCGCGCTTAGTCAAACAGAAGATCGTGTAAGAGGCTTTGAAGCAGGAGCCAACGACTATTTATCTAAGCCATTCAA
TAAACAAGAGCTAGCTGCGCGCATCCAAGCGCACTTAACGGCAAGCCAAGCTGAAATGCGCCACATGGAGAATAAGATAC
TTGAATCTGAACTTCGCCAACGAGCGGCTGTAGAGGCAAGCTTATTAGAAACTCAAGGGCGATTGTTGGAACAACTGGAA
TCGGCTCCTGAAGCGATTATCTGTTTGCGTGAAGATAAACGTATCCGGTTTGCTAATGAAGCTGCTTGCAAGCTATTCAA
GCGTAACTTAGAACAATTAAAACGTTCATCTGCCGATGAGTTGATTGCACCTAAGTATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAAAACATCGAAGCAGACATTCTTAAACTACCTGAAGGCTCA
GGCTTAGATGTCATGTATATCTTTAATGTTGGCGGAGGAGCCAATGCCGCTCGCATACACAACCTAGAAACCGCAGTAGA
GGTGCTTTCAAGTTATGCTTTTGATGGCGATAAAGACCAGCTGCAGAAGCTGAAAGAACTCGGTGGAGAATTTACACGCC
TTGCAGACAAAGCGCTTGGTAACAAAAAAGACAAACAAGAGCTAATGCGAGAAATTCTGGTCGACGCAATGACACATGCC
TTAGAGTATTGGGAGTCAGTCACTGGTGAAAGTAAATTCGCATTTGCCGAACAAAGTGGCTTATGGCGCGTTTATCTTGA
CCGTAGCACTCTGCAAACACGCACTTTGGATAAATACATGCGTATAGAAACGCTGCCAAAAACGCCACGTTGGAGAACGG
TATTGAGCTCGATAGAATTCATCCTTGAACACTGTAAAGAACAGAGTCCTGAGCGTGCGTACATCGAAGCTCAACGAGAT
AAACTACAGCGACTGTTGACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764