Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AW03_RS14765 Genome accession   NZ_CP007173
Coordinates   2875497..2876192 (-) Length   231 a.a.
NCBI ID   WP_015483587.1    Uniprot ID   -
Organism   Bacillus subtilis HJ5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2870497..2881192
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW03_RS14745 (AW03_028510) yttA 2870924..2871670 (+) 747 WP_015483586.1 LMBR1 domain-containing protein -
  AW03_RS14750 (AW03_028520) bceB 2871707..2873647 (-) 1941 WP_015384426.1 bacitracin ABC transporter permease BceB -
  AW03_RS14755 (AW03_028530) bceA 2873637..2874398 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  AW03_RS14760 (AW03_028540) bceS 2874500..2875504 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  AW03_RS14765 (AW03_028550) braR 2875497..2876192 (-) 696 WP_015483587.1 two-component response regulator BceR Regulator
  AW03_RS14770 (AW03_028560) ytrF 2876289..2877599 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  AW03_RS14775 (AW03_028570) ytrE 2877589..2878284 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  AW03_RS14780 (AW03_028580) ytrD 2878299..2879276 (-) 978 WP_015483588.1 ABC transporter permease YtrD -
  AW03_RS14785 (AW03_028590) ytrC 2879306..2880292 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  AW03_RS14790 (AW03_028600) ytrB 2880286..2881164 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26921.82 Da        Isoelectric Point: 5.3731

>NTDB_id=102791 AW03_RS14765 WP_015483587.1 2875497..2876192(-) (braR) [Bacillus subtilis HJ5]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=102791 AW03_RS14765 WP_015483587.1 2875497..2876192(-) (braR) [Bacillus subtilis HJ5]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAATCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment