Detailed information NTG1027763

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AB4073_RS11065
• Genome accession: NZ_CP162643
• Coordinates: 2350747..2351445 (-)
• Length: 232 a.a.
• NCBI ID: WP_031948176.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae strain 128-92
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2345747..2356445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4073_RS11035 (AB4073_11035)	-	2346054..2346494 (-)	441	WP_061875521.1	SRPBCC family protein	-
AB4073_RS11040 (AB4073_11040)	tadA	2346565..2347068 (-)	504	WP_057106324.1	tRNA adenosine(34) deaminase TadA	-
AB4073_RS11045 (AB4073_11045)	-	2347075..2348199 (-)	1125	WP_079748353.1	enoyl-CoA hydratase/isomerase family protein	-
AB4073_RS11050 (AB4073_11050)	ung	2348196..2348909 (-)	714	WP_016145102.1	uracil-DNA glycosylase	-
AB4073_RS11055 (AB4073_11055)	-	2348963..2349559 (-)	597	WP_163119584.1	6-carboxytetrahydropterin synthase	-
AB4073_RS11060 (AB4073_11060)	gspK	2349788..2350747 (-)	960	WP_368677641.1	type II secretion system minor pseudopilin GspK	-
AB4073_RS11065 (AB4073_11065)	xcpW	2350747..2351445 (-)	699	WP_031948176.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AB4073_RS11070 (AB4073_11070)	xcpV	2351445..2351825 (-)	381	WP_368677642.1	type II secretion system minor pseudopilin GspI	Machinery gene
AB4073_RS11075 (AB4073_11075)	-	2351815..2352369 (-)	555	WP_057106321.1	type II secretion system protein	-
AB4073_RS11080 (AB4073_11080)	-	2352376..2352984 (-)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
AB4073_RS11085 (AB4073_11085)	-	2353021..2353794 (-)	774	WP_368677643.1	TatD family hydrolase	-
AB4073_RS11090 (AB4073_11090)	-	2353812..2354153 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
AB4073_RS11095 (AB4073_11095)	-	2354164..2355144 (-)	981	WP_368677644.1	DNA polymerase III subunit delta'	-
AB4073_RS11100 (AB4073_11100)	kdsB	2355158..2355919 (-)	762	WP_062848588.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 232 a.a.
• Molecular weight: 26469.35 Da
• Isoelectric Point: 9.5995

>NTDB_id=1027763 AB4073_RS11065 WP_031948176.1 2350747..2351445(-) (xcpW) [Acinetobacter lactucae strain 128-92]
MINNKYSFRRETSSLAARSSSARLIRASGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRDRNAQHEVKLFELQDAYQQV
LRDSLQIIPLSANQGGQLHPALELDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSS
TLLSQVEQFEVIVLTPQEVTRWPEINLDPTKPEEFRKLPKGIKIQLTVAGVSYEWIYSVNQGNLSLSKEGGV

Nucleotide

• Length: 699 bp

>NTDB_id=1027763 AB4073_RS11065 WP_031948176.1 2350747..2351445(-) (xcpW) [Acinetobacter lactucae strain 128-92]
ATGATAAACAATAAATATAGCTTCCGAAGAGAAACTTCAAGTCTTGCAGCACGATCGAGCAGTGCTCGATTAATTCGTGC
CTCAGGATTTACTTTAGTTGAGCTTTTAGTTGCAATTGCAATTTTTGCCATTTTATCTTTGTTGGGGTGGAAGGTTTTTG
ATTATTTATTAAAGGTCCGAGATCGTAATGCTCAACATGAAGTAAAGTTATTTGAATTACAAGATGCTTATCAGCAAGTT
TTACGGGATTCATTGCAAATTATACCGTTATCGGCCAATCAAGGCGGACAGTTACATCCAGCTCTAGAGCTTGATAACCA
AGTTCTTCGCTTTAGTAAAGCTGGTGTTACTGATCCCTTAAAGCAAGGATTATCCCCTTTTGAGCGTATTGAATATCGAT
ATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGTAATTTAAATACTTCAAACAGAGAGCAGCCTTTATCAAGT
ACGCTGTTGAGCCAAGTTGAACAATTTGAAGTTATAGTGTTGACACCGCAAGAAGTGACAAGATGGCCAGAGATTAATCT
TGATCCCACAAAACCTGAAGAGTTTAGAAAGTTACCGAAAGGAATAAAAATACAACTCACCGTTGCAGGAGTAAGTTATG
AGTGGATTTATAGCGTAAATCAAGGGAATTTATCTCTCTCCAAAGAAGGAGGGGTATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (82-211)

• Prokaryotic N-terminal methylation motif (N_methyl) (26-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	84.914	100	0.849