Detailed information
Bioinformatically predicted
Overview
| Name | tsaP | Type | Machinery gene |
| Locus tag | AB4073_RS00035 | Genome accession | NZ_CP162643 |
| Coordinates | 5626..6780 (+) | Length | 384 a.a. |
| NCBI ID | WP_057106021.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae strain 128-92 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 626..11780
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4073_RS00010 (AB4073_00010) | - | 775..1989 (+) | 1215 | WP_368678174.1 | oxygenase MpaB family protein | - |
| AB4073_RS00015 (AB4073_00015) | - | 2057..2263 (-) | 207 | WP_031947118.1 | hypothetical protein | - |
| AB4073_RS00020 (AB4073_00020) | - | 2317..4431 (-) | 2115 | WP_368678175.1 | TonB-dependent copper receptor | - |
| AB4073_RS00025 (AB4073_00025) | - | 4504..4929 (-) | 426 | WP_216946780.1 | DUF2946 family protein | - |
| AB4073_RS00030 (AB4073_00030) | def | 4973..5503 (-) | 531 | WP_016144059.1 | peptide deformylase | - |
| AB4073_RS00035 (AB4073_00035) | tsaP | 5626..6780 (+) | 1155 | WP_057106021.1 | LysM peptidoglycan-binding domain-containing protein | Machinery gene |
| AB4073_RS00040 (AB4073_00040) | dprA | 6801..7934 (+) | 1134 | WP_368678176.1 | DNA-processing protein DprA | Machinery gene |
| AB4073_RS00045 (AB4073_00045) | - | 7986..8555 (+) | 570 | WP_368678177.1 | L-threonylcarbamoyladenylate synthase | - |
| AB4073_RS00050 (AB4073_00050) | - | 8947..9867 (-) | 921 | WP_079748210.1 | DMT family transporter | - |
| AB4073_RS00055 (AB4073_00055) | - | 9972..10625 (-) | 654 | WP_080648756.1 | TetR/AcrR family transcriptional regulator | - |
Sequence
Protein
Download Length: 384 a.a. Molecular weight: 42601.46 Da Isoelectric Point: 7.5935
>NTDB_id=1027738 AB4073_RS00035 WP_057106021.1 5626..6780(+) (tsaP) [Acinetobacter lactucae strain 128-92]
MKKVFDGMVQFHALGIKKHLLAFALFTGVAFGTVAEGYAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFLRKPWRWP
EIWANNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQMTNLQPQVRVESLNNNVPVIPLEHIKQWLE
HSTILPADAIEHTPYIVGTADQRVLAAKGQTIYARGQGLIDGQRYAVYREGEPYYFTDNKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVIPEEEATLPTLFYPVNATQVTDGGKIIRVMGSIGTAGKDSVVTLDRGTVQGVQVGQ
VFDITQQGETIRDPKTKESIKLPGQQIGSLMVFRTFDQLSYAYVLESDLPVKVGSSIQPPRFND
MKKVFDGMVQFHALGIKKHLLAFALFTGVAFGTVAEGYAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFLRKPWRWP
EIWANNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQMTNLQPQVRVESLNNNVPVIPLEHIKQWLE
HSTILPADAIEHTPYIVGTADQRVLAAKGQTIYARGQGLIDGQRYAVYREGEPYYFTDNKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVIPEEEATLPTLFYPVNATQVTDGGKIIRVMGSIGTAGKDSVVTLDRGTVQGVQVGQ
VFDITQQGETIRDPKTKESIKLPGQQIGSLMVFRTFDQLSYAYVLESDLPVKVGSSIQPPRFND
Nucleotide
Download Length: 1155 bp
>NTDB_id=1027738 AB4073_RS00035 WP_057106021.1 5626..6780(+) (tsaP) [Acinetobacter lactucae strain 128-92]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTCGCACTTTTTAC
AGGGGTTGCATTTGGTACGGTAGCAGAGGGTTATGCTGCTAGTCCGAACCATAATCCACCCTCTCTTAAAAGTAATGCAC
CACATGTCTACGTAGTAAAACGGGGAGATACACTCTGGGATATTTCCGGTCACTTTCTCAGGAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAATAATCAACATGTCAAAAATCCGCACTGGATTTATCCGGGTGATCGGTTACTGCTATGTAGTTTAGA
TGGCCGTCCATTGGTTGGGAAAGATGAGGGAGATGGTTGTGTCGGCATTATTCGCCGTTACACAGGTCAAATGACAAATT
TACAACCTCAAGTACGTGTGGAGTCACTAAACAATAACGTACCTGTTATTCCTCTTGAGCATATTAAACAGTGGCTAGAA
CACAGTACTATTCTACCAGCCGATGCAATTGAACATACTCCTTATATAGTTGGTACTGCCGATCAACGTGTACTCGCGGC
AAAAGGTCAAACTATTTATGCACGCGGACAAGGTTTAATTGATGGCCAACGTTATGCAGTCTACCGTGAAGGTGAACCTT
ATTATTTCACCGATAATAAAGGCAAAAAGCACAGTCTAGGTATTGAGCTACAACAAGTTGCCTCGGGCATCGCTATCTCT
TCTGAAAAAGACATTACCACGCTTGAGTTAACTGACAGCTACAATTCTGAAGTACGTCGTGGTGATCGGGTGATACCAGA
AGAAGAGGCTACATTGCCTACTTTATTTTATCCAGTGAATGCTACTCAGGTGACGGATGGCGGCAAAATTATTCGGGTAA
TGGGATCAATTGGTACTGCTGGCAAAGATAGTGTAGTGACTTTGGACAGAGGTACTGTACAAGGTGTTCAAGTAGGTCAA
GTTTTTGATATTACGCAACAAGGTGAAACCATTCGAGATCCTAAAACCAAGGAATCAATAAAGTTACCTGGACAACAAAT
TGGTAGCTTAATGGTTTTTAGAACTTTTGATCAGTTGAGTTATGCCTACGTATTAGAAAGCGATTTACCAGTTAAAGTTG
GTTCAAGCATTCAGCCACCCCGCTTTAATGATTAA
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTCGCACTTTTTAC
AGGGGTTGCATTTGGTACGGTAGCAGAGGGTTATGCTGCTAGTCCGAACCATAATCCACCCTCTCTTAAAAGTAATGCAC
CACATGTCTACGTAGTAAAACGGGGAGATACACTCTGGGATATTTCCGGTCACTTTCTCAGGAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAATAATCAACATGTCAAAAATCCGCACTGGATTTATCCGGGTGATCGGTTACTGCTATGTAGTTTAGA
TGGCCGTCCATTGGTTGGGAAAGATGAGGGAGATGGTTGTGTCGGCATTATTCGCCGTTACACAGGTCAAATGACAAATT
TACAACCTCAAGTACGTGTGGAGTCACTAAACAATAACGTACCTGTTATTCCTCTTGAGCATATTAAACAGTGGCTAGAA
CACAGTACTATTCTACCAGCCGATGCAATTGAACATACTCCTTATATAGTTGGTACTGCCGATCAACGTGTACTCGCGGC
AAAAGGTCAAACTATTTATGCACGCGGACAAGGTTTAATTGATGGCCAACGTTATGCAGTCTACCGTGAAGGTGAACCTT
ATTATTTCACCGATAATAAAGGCAAAAAGCACAGTCTAGGTATTGAGCTACAACAAGTTGCCTCGGGCATCGCTATCTCT
TCTGAAAAAGACATTACCACGCTTGAGTTAACTGACAGCTACAATTCTGAAGTACGTCGTGGTGATCGGGTGATACCAGA
AGAAGAGGCTACATTGCCTACTTTATTTTATCCAGTGAATGCTACTCAGGTGACGGATGGCGGCAAAATTATTCGGGTAA
TGGGATCAATTGGTACTGCTGGCAAAGATAGTGTAGTGACTTTGGACAGAGGTACTGTACAAGGTGTTCAAGTAGGTCAA
GTTTTTGATATTACGCAACAAGGTGAAACCATTCGAGATCCTAAAACCAAGGAATCAATAAAGTTACCTGGACAACAAAT
TGGTAGCTTAATGGTTTTTAGAACTTTTGATCAGTTGAGTTATGCCTACGTATTAGAAAGCGATTTACCAGTTAAAGTTG
GTTCAAGCATTCAGCCACCCCGCTTTAATGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tsaP | Acinetobacter baumannii D1279779 |
89.323 |
100 |
0.893 |