Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB3Z07_RS04620 Genome accession   NZ_CP162630
Coordinates   930301..930483 (+) Length   60 a.a.
NCBI ID   WP_251684362.1    Uniprot ID   -
Organism   Metabacillus halosaccharovorans strain Hao 2024     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 925301..935483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Z07_RS04590 (AB3Z07_04590) argF 925786..926727 (+) 942 WP_251684370.1 ornithine carbamoyltransferase -
  AB3Z07_RS04595 (AB3Z07_04595) - 926845..927024 (+) 180 WP_026561040.1 YjzC family protein -
  AB3Z07_RS04600 (AB3Z07_04600) - 927106..927297 (-) 192 WP_078435211.1 YjzD family protein -
  AB3Z07_RS04605 (AB3Z07_04605) - 927604..928335 (+) 732 WP_368658596.1 hypothetical protein -
  AB3Z07_RS04610 (AB3Z07_04610) - 928500..929249 (+) 750 WP_368658597.1 hypothetical protein -
  AB3Z07_RS04615 (AB3Z07_04615) med 929321..930274 (+) 954 WP_251684364.1 BMP family ABC transporter substrate-binding protein Regulator
  AB3Z07_RS04620 (AB3Z07_04620) comZ 930301..930483 (+) 183 WP_251684362.1 ComZ family protein Regulator
  AB3Z07_RS04625 (AB3Z07_04625) - 930739..931047 (-) 309 WP_251684360.1 hypothetical protein -
  AB3Z07_RS04630 (AB3Z07_04630) - 931270..932202 (+) 933 WP_251684358.1 beta-ketoacyl-ACP synthase III -
  AB3Z07_RS04635 (AB3Z07_04635) fabF 932230..933471 (+) 1242 WP_368658598.1 beta-ketoacyl-ACP synthase II -
  AB3Z07_RS04640 (AB3Z07_04640) - 933621..934415 (+) 795 WP_251684354.1 DUF2268 domain-containing protein -
  AB3Z07_RS04645 (AB3Z07_04645) - 934557..935309 (+) 753 WP_026561050.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6894.09 Da        Isoelectric Point: 4.6828

>NTDB_id=1027660 AB3Z07_RS04620 WP_251684362.1 930301..930483(+) (comZ) [Metabacillus halosaccharovorans strain Hao 2024]
MDQHPKTMEFMQIAMKYLPEAKQKLEGSGIELSMETIQPMLELFTKVMGEAYELGKKDAQ

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1027660 AB3Z07_RS04620 WP_251684362.1 930301..930483(+) (comZ) [Metabacillus halosaccharovorans strain Hao 2024]
ATGGATCAGCACCCAAAAACAATGGAATTTATGCAAATTGCTATGAAGTACCTACCTGAAGCAAAACAAAAGCTTGAAGG
CTCAGGAATTGAATTATCAATGGAAACCATCCAACCAATGCTTGAACTATTTACAAAAGTTATGGGAGAAGCATATGAGC
TAGGGAAAAAGGATGCTCAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(6-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

74.138

96.667

0.717

Multiple sequence alignment