Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AB3U43_RS10425 Genome accession   NZ_CP162629
Coordinates   1183908..1184591 (+) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus cereus strain L6     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1178908..1189591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3U43_RS10405 (AB3U43_10405) - 1179970..1181616 (+) 1647 WP_086392109.1 peptide ABC transporter substrate-binding protein -
  AB3U43_RS10410 (AB3U43_10410) - 1181646..1181849 (-) 204 WP_000559971.1 hypothetical protein -
  AB3U43_RS10415 (AB3U43_10415) spx 1182443..1182838 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AB3U43_RS10420 (AB3U43_10420) - 1182888..1183562 (-) 675 WP_000362615.1 TerC family protein -
  AB3U43_RS10425 (AB3U43_10425) mecA 1183908..1184591 (+) 684 WP_000350716.1 adaptor protein MecA Regulator
  AB3U43_RS10430 (AB3U43_10430) - 1184664..1186208 (+) 1545 WP_000799195.1 cardiolipin synthase -
  AB3U43_RS10435 (AB3U43_10435) - 1186290..1187534 (+) 1245 WP_086392110.1 competence protein CoiA -
  AB3U43_RS10440 (AB3U43_10440) pepF 1187586..1189412 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=1027615 AB3U43_RS10425 WP_000350716.1 1183908..1184591(+) (mecA) [Bacillus cereus strain L6]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1027615 AB3U43_RS10425 WP_000350716.1 1183908..1184591(+) (mecA) [Bacillus cereus strain L6]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAAGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCTCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment