Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB3U43_RS10340 Genome accession   NZ_CP162629
Coordinates   1165364..1165540 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain L6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160364..1170540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3U43_RS10320 (AB3U43_10320) clpC 1160695..1163295 (+) 2601 WP_000365407.1 ATP-dependent chaperone ClpB Regulator
  AB3U43_RS10325 (AB3U43_10325) - 1163334..1163516 (-) 183 WP_001211116.1 YjzD family protein -
  AB3U43_RS10330 (AB3U43_10330) - 1163673..1164407 (+) 735 WP_000028692.1 hydrolase -
  AB3U43_RS10335 (AB3U43_10335) - 1164437..1165309 (+) 873 WP_002102826.1 NAD(P)-dependent oxidoreductase -
  AB3U43_RS10340 (AB3U43_10340) comZ 1165364..1165540 (+) 177 WP_001986215.1 ComZ family protein Regulator
  AB3U43_RS10345 (AB3U43_10345) fabH 1166078..1167010 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  AB3U43_RS10350 (AB3U43_10350) fabF 1167042..1168280 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  AB3U43_RS10355 (AB3U43_10355) - 1168387..1169175 (+) 789 WP_000513275.1 DUF2268 domain-containing protein -
  AB3U43_RS10360 (AB3U43_10360) - 1169319..1170065 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=1027612 AB3U43_RS10340 WP_001986215.1 1165364..1165540(+) (comZ) [Bacillus cereus strain L6]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1027612 AB3U43_RS10340 WP_001986215.1 1165364..1165540(+) (comZ) [Bacillus cereus strain L6]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment