Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BJR96_RS02520 Genome accession   NZ_LT545678
Coordinates   444537..445313 (-) Length   258 a.a.
NCBI ID   WP_000704975.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate SA111     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 439537..450313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJR96_RS02515 (SA111_00475) - 443920..444453 (-) 534 WP_001239184.1 DUF402 domain-containing protein -
  BJR96_RS02520 (SA111_00476) recX 444537..445313 (-) 777 WP_000704975.1 recombination regulator RecX Regulator
  BJR96_RS02525 (SA111_00477) rlmD 445412..446767 (+) 1356 WP_001103615.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  BJR96_RS02530 (SA111_00478) - 447036..447800 (+) 765 WP_069986598.1 nucleoside phosphorylase -
  BJR96_RS02535 (SA111_00479) - 447834..448262 (+) 429 WP_000267393.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30717.64 Da        Isoelectric Point: 9.8205

>NTDB_id=1027470 BJR96_RS02520 WP_000704975.1 444537..445313(-) (recX) [Streptococcus agalactiae isolate SA111]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIINAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYL
QQHDIDSKIIPQIINNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQSKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKFSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1027470 BJR96_RS02520 WP_000704975.1 444537..445313(-) (recX) [Streptococcus agalactiae isolate SA111]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAATTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATACGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAAGTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTAATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAACTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAGCAAACTTCCACTAAAAGCACTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGCGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTCTCAAAAAAATATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

38.314

100

0.388