Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4Y39_RS20125 Genome accession   NZ_CP162607
Coordinates   4345562..4345972 (-) Length   136 a.a.
NCBI ID   WP_045181955.1    Uniprot ID   A0AB39B227
Organism   Pseudomonas sp. Hg7Tf     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4340562..4350972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4Y39_RS20110 (AB4Y39_20110) - 4342539..4344584 (-) 2046 WP_045181961.1 methyl-accepting chemotaxis protein -
  AB4Y39_RS20115 (AB4Y39_20115) - 4344600..4345154 (-) 555 WP_082071297.1 chemotaxis protein CheW -
  AB4Y39_RS20120 (AB4Y39_20120) pilH 4345151..4345516 (-) 366 WP_045181957.1 twitching motility response regulator PilH -
  AB4Y39_RS20125 (AB4Y39_20125) pilG 4345562..4345972 (-) 411 WP_045181955.1 twitching motility response regulator PilG Regulator
  AB4Y39_RS20130 (AB4Y39_20130) gshB 4346200..4347153 (+) 954 WP_045181953.1 glutathione synthase -
  AB4Y39_RS20135 (AB4Y39_20135) - 4347263..4348168 (+) 906 WP_045181951.1 energy transducer TonB -
  AB4Y39_RS20140 (AB4Y39_20140) - 4348220..4348789 (+) 570 WP_045181949.1 YqgE/AlgH family protein -
  AB4Y39_RS20145 (AB4Y39_20145) ruvX 4348789..4349223 (+) 435 WP_045181945.1 Holliday junction resolvase RuvX -
  AB4Y39_RS20150 (AB4Y39_20150) pyrR 4349284..4349802 (+) 519 WP_045181943.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB4Y39_RS20155 (AB4Y39_20155) - 4349815..4350819 (+) 1005 WP_045181941.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14916.19 Da        Isoelectric Point: 5.5984

>NTDB_id=1027451 AB4Y39_RS20125 WP_045181955.1 4345562..4345972(-) (pilG) [Pseudomonas sp. Hg7Tf]
MEQPGAALKVMVIDDSKTIRRTAQLLLSEVGCEVITATDGFDALAKIVDQHPQIIFVDVLMPRLDGYQTCALIKHNSAFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1027451 AB4Y39_RS20125 WP_045181955.1 4345562..4345972(-) (pilG) [Pseudomonas sp. Hg7Tf]
ATGGAACAGCCCGGCGCGGCACTGAAGGTGATGGTGATCGATGACTCGAAAACGATTCGTCGAACCGCCCAATTGTTGCT
CAGTGAGGTGGGGTGTGAAGTTATCACTGCCACTGACGGCTTTGATGCCCTGGCCAAGATCGTCGACCAGCATCCACAGA
TTATTTTTGTCGATGTGCTGATGCCGCGTCTGGATGGTTACCAGACCTGCGCCCTGATCAAGCACAACAGTGCCTTCAAG
GACACCCCAGTGATCCTCCTGTCGTCCCGTGACGGCTTGTTCGACAAGGCCAGGGGCCGTGTAGTCGGCTCCGATCAATT
TTTAACCAAGCCATTCAGCAAGGAAGAACTGCTGGACGCAATCAGGGCGCATGTGCCCGGGTTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.6

91.912

0.64

Multiple sequence alignment