Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4P93_RS19005 Genome accession   NZ_CP162596
Coordinates   3980976..3981380 (-) Length   134 a.a.
NCBI ID   WP_116028398.1    Uniprot ID   -
Organism   Pseudomonas sp. B26140     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3975976..3986380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4P93_RS18990 (AB4P93_18970) - 3977785..3979845 (-) 2061 WP_210704030.1 methyl-accepting chemotaxis protein -
  AB4P93_RS18995 (AB4P93_18975) - 3980000..3980539 (-) 540 WP_150593608.1 chemotaxis protein CheW -
  AB4P93_RS19000 (AB4P93_18980) pilH 3980550..3980915 (-) 366 WP_042561532.1 twitching motility response regulator PilH -
  AB4P93_RS19005 (AB4P93_18985) pilG 3980976..3981380 (-) 405 WP_116028398.1 twitching motility response regulator PilG Regulator
  AB4P93_RS19010 (AB4P93_18990) gshB 3981606..3982577 (+) 972 WP_210704029.1 glutathione synthase -
  AB4P93_RS19015 (AB4P93_18995) - 3982731..3983630 (+) 900 WP_210704028.1 energy transducer TonB -
  AB4P93_RS19020 (AB4P93_19000) - 3983824..3984396 (+) 573 WP_210704138.1 YqgE/AlgH family protein -
  AB4P93_RS19025 (AB4P93_19005) ruvX 3984396..3984833 (+) 438 WP_042561537.1 Holliday junction resolvase RuvX -
  AB4P93_RS19030 (AB4P93_19010) pyrR 3984916..3985422 (+) 507 WP_395593216.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14565.97 Da        Isoelectric Point: 7.1346

>NTDB_id=1027345 AB4P93_RS19005 WP_116028398.1 3980976..3981380(-) (pilG) [Pseudomonas sp. B26140]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1027345 AB4P93_RS19005 WP_116028398.1 3980976..3981380(-) (pilG) [Pseudomonas sp. B26140]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGTACCGCCGAAACCTTGTT
GAAGAATGTCGGTTGCGAAGTCATCACGGCAATCGACGGTTTCGACGCTTTGGCGAAGATCGCCGACAACCACCCCGGGA
TCATTTTCGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGTTGTTCGACAAGGCCAAGGGGCGGATTGTCGGCTCCGATCAATT
TTTGACCAAACCATTCAGCAAGGAAGAACTGCTCAGCGCGATCCAGGCCCATGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment