Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4P91_RS07550 Genome accession   NZ_CP162590
Coordinates   1703421..1703825 (+) Length   134 a.a.
NCBI ID   WP_042561533.1    Uniprot ID   -
Organism   Pseudomonas sp. B21128     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1698421..1708825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4P91_RS07525 (AB4P91_07510) pyrR 1699379..1699885 (-) 507 WP_150593604.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB4P91_RS07530 (AB4P91_07515) ruvX 1699968..1700405 (-) 438 WP_042561537.1 Holliday junction resolvase RuvX -
  AB4P91_RS07535 (AB4P91_07520) - 1700405..1700977 (-) 573 WP_395604574.1 YqgE/AlgH family protein -
  AB4P91_RS07540 (AB4P91_07525) - 1701171..1702070 (-) 900 WP_395604575.1 energy transducer TonB -
  AB4P91_RS07545 (AB4P91_07530) gshB 1702224..1703195 (-) 972 WP_042561534.1 glutathione synthase -
  AB4P91_RS07550 (AB4P91_07535) pilG 1703421..1703825 (+) 405 WP_042561533.1 twitching motility response regulator PilG Regulator
  AB4P91_RS07555 (AB4P91_07540) pilH 1703886..1704251 (+) 366 WP_042561532.1 twitching motility response regulator PilH -
  AB4P91_RS07560 (AB4P91_07545) - 1704262..1704801 (+) 540 WP_150593608.1 chemotaxis protein CheW -
  AB4P91_RS07565 (AB4P91_07550) - 1704957..1707017 (+) 2061 WP_395604576.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=1027283 AB4P91_RS07550 WP_042561533.1 1703421..1703825(+) (pilG) [Pseudomonas sp. B21128]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNNAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1027283 AB4P91_RS07550 WP_042561533.1 1703421..1703825(+) (pilG) [Pseudomonas sp. B21128]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGTACCGCCGAAACCTTGTT
GAAGAATGTCGGTTGTGAAGTCATCACGGCAATCGACGGTTTCGACGCTTTGGCGAAGATCGCCGACAACCACCCCGGAA
TCATTTTCGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAATGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGACTGTTCGACAAGGCCAAGGGGCGGATTGTCGGCTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment