Detailed information NTG1027252

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECTO75_RS21965
• Genome accession: NZ_LS998785
• Coordinates: 4507338..4508363 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate EC-TO75
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4502338..4513363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECTO75_RS21955 (ECTO75_04440)	rpmE	4504569..4504781 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ECTO75_RS21960 (ECTO75_04441)	priA	4504984..4507182 (+)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ECTO75_RS21965 (ECTO75_04442)	cytR	4507338..4508363 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ECTO75_RS21970 (ECTO75_04443)	ftsN	4508455..4509414 (+)	960	WP_000068837.1	cell division protein FtsN	-
ECTO75_RS21975 (ECTO75_04444)	hslV	4509507..4510037 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECTO75_RS21980 (ECTO75_04445)	hslU	4510047..4511378 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ECTO75_RS21985 (ECTO75_04446)	menA	4511445..4512371 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECTO75_RS21990 (ECTO75_04447)	rraA	4512464..4512949 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECTO75_RS21995 (ECTO75_04448)	zapB	4513034..4513279 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1027252 ECTO75_RS21965 WP_000644904.1 4507338..4508363(+) (cytR) [Escherichia coli isolate EC-TO75]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1027252 ECTO75_RS21965 WP_000644904.1 4507338..4508363(+) (cytR) [Escherichia coli isolate EC-TO75]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628