Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4P97_RS21660 Genome accession   NZ_CP162582
Coordinates   4627011..4627415 (-) Length   134 a.a.
NCBI ID   WP_042561533.1    Uniprot ID   -
Organism   Pseudomonas sp. A1230     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4622011..4632415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4P97_RS21645 (AB4P97_21590) - 4623820..4625880 (-) 2061 WP_042561530.1 methyl-accepting chemotaxis protein -
  AB4P97_RS21650 (AB4P97_21595) - 4626035..4626574 (-) 540 WP_042561531.1 chemotaxis protein CheW -
  AB4P97_RS21655 (AB4P97_21600) pilH 4626585..4626950 (-) 366 WP_042561532.1 twitching motility response regulator PilH -
  AB4P97_RS21660 (AB4P97_21605) pilG 4627011..4627415 (-) 405 WP_042561533.1 twitching motility response regulator PilG Regulator
  AB4P97_RS21665 (AB4P97_21610) gshB 4627641..4628612 (+) 972 WP_395601599.1 glutathione synthase -
  AB4P97_RS21670 (AB4P97_21615) - 4628766..4629665 (+) 900 WP_042561535.1 energy transducer TonB -
  AB4P97_RS21675 (AB4P97_21620) - 4629859..4630431 (+) 573 WP_395602963.1 YqgE/AlgH family protein -
  AB4P97_RS21680 (AB4P97_21625) ruvX 4630431..4630868 (+) 438 WP_042561537.1 Holliday junction resolvase RuvX -
  AB4P97_RS21685 (AB4P97_21630) pyrR 4630951..4631457 (+) 507 WP_042561538.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=1027191 AB4P97_RS21660 WP_042561533.1 4627011..4627415(-) (pilG) [Pseudomonas sp. A1230]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNNAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1027191 AB4P97_RS21660 WP_042561533.1 4627011..4627415(-) (pilG) [Pseudomonas sp. A1230]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGTACCGCCGAAACCTTGTT
GAAGAATGTCGGTTGCGAAGTCATCACGGCAATCGACGGTTTCGACGCTTTGGCGAAGATCGCCGACAACCACCCCGGGA
TCATTTTCGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAATGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGTTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCCAGGCCCATGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment