Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4P92_RS17780 Genome accession   NZ_CP162581
Coordinates   3849915..3850319 (+) Length   134 a.a.
NCBI ID   WP_042561533.1    Uniprot ID   -
Organism   Pseudomonas sp. A0308     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3844915..3855319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4P92_RS17755 (AB4P92_17725) pyrR 3845873..3846379 (-) 507 WP_042561538.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB4P92_RS17760 (AB4P92_17730) ruvX 3846462..3846899 (-) 438 WP_042561537.1 Holliday junction resolvase RuvX -
  AB4P92_RS17765 (AB4P92_17735) - 3846899..3847471 (-) 573 WP_210623090.1 YqgE/AlgH family protein -
  AB4P92_RS17770 (AB4P92_17740) - 3847665..3848564 (-) 900 WP_042561535.1 energy transducer TonB -
  AB4P92_RS17775 (AB4P92_17745) gshB 3848718..3849689 (-) 972 WP_395597943.1 glutathione synthase -
  AB4P92_RS17780 (AB4P92_17750) pilG 3849915..3850319 (+) 405 WP_042561533.1 twitching motility response regulator PilG Regulator
  AB4P92_RS17785 (AB4P92_17755) pilH 3850380..3850745 (+) 366 WP_042561532.1 twitching motility response regulator PilH -
  AB4P92_RS17790 (AB4P92_17760) - 3850756..3851295 (+) 540 WP_042561531.1 chemotaxis protein CheW -
  AB4P92_RS17795 (AB4P92_17765) - 3851450..3853510 (+) 2061 WP_042561530.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=1027154 AB4P92_RS17780 WP_042561533.1 3849915..3850319(+) (pilG) [Pseudomonas sp. A0308]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNNAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1027154 AB4P92_RS17780 WP_042561533.1 3849915..3850319(+) (pilG) [Pseudomonas sp. A0308]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGTACCGCCGAAACCTTGTT
GAAGAATGTCGGTTGCGAAGTCATCACGGCAATCGACGGTTTCGACGCTTTGGCGAAGATCGCCGACAACCACCCCGGGA
TCATTTTCGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAATGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGTTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCCAGGCCCATGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment