Detailed information NTG1027071

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: AB3N04_RS07480
• Genome accession: NZ_CP162551
• Coordinates: 1171941..1174310 (-)
• Length: 789 a.a.
• NCBI ID: WP_368505470.1
• Uniprot ID: A0AB39BW49
• Organism: Alkalihalophilus sp. As8PL
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1166941..1179310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3N04_RS07460 (AB3N04_07460)	-	1168175..1168351 (-)	177	WP_368505467.1	hypothetical protein	-
AB3N04_RS07465 (AB3N04_07465)	dtd	1168587..1169027 (-)	441	WP_317123101.1	D-aminoacyl-tRNA deacylase	-
AB3N04_RS07470 (AB3N04_07470)	-	1169048..1171231 (-)	2184	WP_368505468.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
AB3N04_RS07475 (AB3N04_07475)	-	1171423..1171938 (-)	516	WP_368505469.1	adenine phosphoribosyltransferase	-
AB3N04_RS07480 (AB3N04_07480)	recJ	1171941..1174310 (-)	2370	WP_368505470.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
AB3N04_RS07485 (AB3N04_07485)	-	1174389..1174727 (-)	339	WP_368505471.1	lipopolysaccharide assembly LapA domain-containing protein	-
AB3N04_RS07490 (AB3N04_07490)	-	1174746..1175645 (-)	900	WP_368505472.1	cation diffusion facilitator family transporter	-
AB3N04_RS07495 (AB3N04_07495)	secF	1175759..1176703 (-)	945	WP_368505473.1	protein translocase subunit SecF	-
AB3N04_RS07500 (AB3N04_07500)	secD	1176693..1177997 (-)	1305	WP_368506010.1	protein translocase subunit SecD	-
AB3N04_RS07505 (AB3N04_07505)	-	1178152..1178430 (-)	279	WP_368505474.1	post-transcriptional regulator	-
AB3N04_RS07510 (AB3N04_07510)	-	1178468..1178953 (-)	486	WP_368505475.1	COG2426 family protein	-

Sequence

Protein

• Length: 789 a.a.
• Molecular weight: 88282.64 Da
• Isoelectric Point: 5.0260

>NTDB_id=1027071 AB3N04_RS07480 WP_368505470.1 1171941..1174310(-) (recJ) [Alkalihalophilus sp. As8PL]
MLKPKARWKIQEQDDNKVESLVKELGVDVLVAQLLINRGIDTPEAAKTFLNSEEMTYHDPYLLSGMKEAITRINEAITNQ
EKILIFGDYDADGVSSTSVMIYTLKELGAIFDYYIPNRFTEGYGPNEPALRRAKEEGYTLVVTVDTGISAVHEANVAREI
GLDFIVTDHHEAPPTLPDAYAIVNPKKPGCTYPFKGLAGVGVAFKVAQALLGRIPKELLDIVVIGTIADLVPLVDENRLM
AKEGLRALQSTSKPGLRALMKVCGVGQDALNGDHVGFGIGPRINAAGRLDSADPAVELMITNDSSEAEHLAAEIDALNKQ
RQSIVNAITEEAVEIVETTYPPSENDVLIIAKPGWNAGVIGIVASRLVERFYRPTIVLSIDEEKGLAKGSARSIEGFDMF
SELSKSRDILPHFGGHPMAAGLTMKEADLDLLRERLNEQAKEVLTEEDFKPLTKIDLATSVDHISLSVIKQLEALAPFGV
SNPTPKVMIENVHIDQMRRIGSEANHLKISFAQNGASLDGIGFHLGHLHDEISQTAKLSAIGTLSINEWNGHVKPQMMLE
DLAVNEWQLFDWRSIQQKRLDDRLLEIPVERRIIISFQEESANQLGLHCEDIRKAEEVFHATGLFEDKYVILLDVPNTRD
ELSRLFTGQGTPSRVYTIFHQQEDSFFTTNPNRDQFKWFYAFLLKRKTFDLKKHGLDLAKHKGWSKHTIDFMSQVFLELG
FVTIDNGILALSDSPEKKGLDESKSYLRKQEQAKIENQFVYSSYEELKQWFNRVILPTEIDERQIKETV

Nucleotide

• Length: 2370 bp

>NTDB_id=1027071 AB3N04_RS07480 WP_368505470.1 1171941..1174310(-) (recJ) [Alkalihalophilus sp. As8PL]
ATGTTAAAACCTAAGGCAAGATGGAAAATACAAGAGCAAGATGATAACAAAGTAGAGAGTCTTGTCAAAGAGCTAGGTGT
AGATGTACTTGTTGCGCAATTATTAATTAATCGTGGCATTGATACACCAGAAGCTGCAAAAACGTTTTTAAACAGTGAAG
AAATGACTTATCACGATCCGTATTTACTCTCGGGTATGAAAGAGGCCATTACACGTATAAATGAAGCTATTACTAATCAA
GAAAAGATCCTGATTTTTGGAGATTATGATGCTGATGGAGTGAGTAGTACCTCGGTCATGATCTACACGTTAAAAGAGCT
AGGGGCTATTTTTGATTATTATATTCCTAATCGGTTCACAGAAGGCTATGGTCCTAATGAGCCGGCTTTGCGCCGTGCAA
AAGAAGAAGGCTATACGCTTGTTGTAACAGTAGATACAGGAATCTCTGCTGTTCATGAGGCCAATGTGGCAAGAGAAATT
GGACTTGATTTTATTGTAACCGATCACCACGAAGCACCACCGACACTGCCTGATGCGTATGCGATTGTCAATCCGAAAAA
GCCTGGATGTACGTACCCGTTTAAAGGGCTAGCTGGGGTAGGGGTTGCTTTTAAGGTAGCTCAAGCTTTACTTGGAAGAA
TACCAAAAGAGTTGCTTGATATTGTGGTGATTGGAACCATTGCTGACTTAGTTCCATTAGTGGATGAGAATCGATTAATG
GCAAAAGAGGGCTTAAGAGCTCTGCAATCCACATCAAAGCCAGGCTTGCGTGCGTTAATGAAAGTATGTGGCGTTGGTCA
AGATGCCTTAAATGGAGACCATGTCGGCTTTGGTATTGGCCCGCGTATTAATGCAGCCGGACGACTAGATTCAGCTGATC
CAGCAGTCGAATTGATGATTACAAATGACTCTAGCGAAGCTGAACATTTAGCAGCTGAAATTGATGCTCTTAATAAACAA
CGTCAAAGTATTGTAAATGCTATTACAGAAGAAGCAGTAGAAATCGTTGAAACGACTTATCCACCTTCTGAGAATGACGT
TTTGATTATTGCCAAGCCCGGCTGGAATGCAGGGGTTATTGGGATCGTAGCATCACGACTTGTAGAACGCTTCTATCGTC
CGACTATTGTGCTTAGCATAGATGAAGAAAAAGGGTTAGCTAAAGGTTCGGCAAGAAGCATCGAAGGCTTTGATATGTTC
TCAGAGTTATCAAAGAGCAGAGATATCCTTCCTCACTTCGGTGGGCATCCGATGGCGGCAGGGCTTACGATGAAAGAAGC
TGACTTAGATCTGTTACGCGAACGGTTAAATGAGCAGGCGAAAGAAGTGTTAACGGAAGAAGATTTCAAGCCTCTCACAA
AAATAGATCTTGCAACAAGTGTCGATCACATATCCTTATCGGTCATAAAGCAACTTGAAGCACTGGCACCATTTGGGGTG
AGTAACCCAACACCTAAAGTCATGATTGAAAATGTTCATATTGATCAGATGCGTCGAATTGGTAGTGAGGCGAATCACTT
AAAAATAAGCTTCGCTCAAAATGGCGCTAGTCTTGATGGCATTGGCTTTCATTTAGGTCACTTGCATGATGAAATTAGCC
AAACAGCTAAACTATCCGCAATTGGGACGTTATCTATTAATGAGTGGAATGGACATGTGAAACCACAAATGATGTTAGAG
GATCTTGCGGTTAATGAATGGCAACTATTTGATTGGCGCAGTATTCAACAAAAGCGATTAGACGATCGATTGTTGGAGAT
ACCAGTAGAGAGACGAATCATTATTTCTTTTCAAGAAGAATCGGCGAATCAACTTGGCTTGCATTGTGAAGATATTAGAA
AGGCTGAAGAAGTCTTTCATGCTACGGGCTTGTTTGAAGATAAATATGTGATTTTACTAGATGTTCCGAATACAAGGGAT
GAGTTAAGCCGTTTATTTACGGGCCAAGGAACACCTAGTCGGGTTTATACGATTTTTCATCAGCAAGAGGACTCCTTTTT
TACAACAAATCCTAACCGTGATCAATTTAAATGGTTTTATGCGTTTTTGCTGAAACGTAAAACATTTGATTTGAAAAAAC
ATGGTTTAGATTTAGCGAAACATAAAGGTTGGTCAAAACACACAATTGATTTCATGTCACAGGTGTTTTTAGAGCTCGGT
TTTGTTACAATAGACAATGGTATTCTCGCGCTTAGTGATTCACCTGAGAAAAAAGGGTTAGATGAATCTAAAAGTTATTT
ACGAAAACAAGAACAAGCAAAAATAGAAAATCAATTCGTTTATTCTTCCTATGAGGAATTAAAGCAATGGTTCAACCGCG
TAATTCTTCCGACTGAAATAGATGAACGACAGATCAAGGAGACGGTGTAA

Domains

Predicted by InterproScan.

• DHH family (DHH) (82-226)

• RecJ OB domain (RecJ_OB) (455-561)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-771)

• DHHA1 domain (DHHA1) (317-439)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	52.692	98.859	0.521