Detailed information NTG1027059

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECTO217_RS25495
• Genome accession: NZ_LS992192
• Coordinates: 5048162..5049187 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli isolate Escherichia coli str. TO217
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5043162..5054187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECTO217_RS25475 (ECTO217_05049)	metJ	5044347..5044664 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ECTO217_RS25480 (ECTO217_05050)	yiiX	5044724..5045332 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ECTO217_RS25485 (ECTO217_05051)	rpmE	5045393..5045605 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ECTO217_RS25490 (ECTO217_05052)	priA	5045808..5048006 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ECTO217_RS25495 (ECTO217_05053)	cytR	5048162..5049187 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ECTO217_RS25500 (ECTO217_05054)	ftsN	5049279..5050238 (+)	960	WP_000068834.1	cell division protein FtsN	-
ECTO217_RS25505 (ECTO217_05055)	hslV	5050331..5050861 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECTO217_RS25510 (ECTO217_05056)	hslU	5050871..5052202 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ECTO217_RS25515 (ECTO217_05057)	menA	5052269..5053195 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECTO217_RS25520 (ECTO217_05058)	rraA	5053288..5053773 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECTO217_RS25525 (ECTO217_05059)	zapB	5053858..5054103 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1027059 ECTO217_RS25495 WP_000644908.1 5048162..5049187(+) (cytR) [Escherichia coli isolate Escherichia coli str. TO217]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1027059 ECTO217_RS25495 WP_000644908.1 5048162..5049187(+) (cytR) [Escherichia coli isolate Escherichia coli str. TO217]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625