Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB3471_RS02490 Genome accession   NZ_CP162520
Coordinates   535889..536299 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae pv. atrofaciens strain UPB 463     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 530889..541299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3471_RS02465 (AB3471_02455) pyrR 531749..532261 (-) 513 WP_003316735.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB3471_RS02470 (AB3471_02460) ruvX 532518..532958 (-) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  AB3471_RS02475 (AB3471_02465) - 532958..533530 (-) 573 WP_004414707.1 YqgE/AlgH family protein -
  AB3471_RS02480 (AB3471_02470) - 533606..534508 (-) 903 WP_004414710.1 energy transducer TonB -
  AB3471_RS02485 (AB3471_02475) gshB 534675..535634 (-) 960 WP_003316740.1 glutathione synthase -
  AB3471_RS02490 (AB3471_02480) pilG 535889..536299 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  AB3471_RS02495 (AB3471_02485) pilH 536346..536711 (+) 366 WP_003316741.1 twitching motility response regulator PilH -
  AB3471_RS02500 (AB3471_02490) - 536726..537265 (+) 540 WP_004414717.1 chemotaxis protein CheW -
  AB3471_RS02505 (AB3471_02495) - 537316..539358 (+) 2043 WP_003414357.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=1026873 AB3471_RS02490 WP_002551738.1 535889..536299(+) (pilG) [Pseudomonas syringae pv. atrofaciens strain UPB 463]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1026873 AB3471_RS02490 WP_002551738.1 535889..536299(+) (pilG) [Pseudomonas syringae pv. atrofaciens strain UPB 463]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment