Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   AB3470_RS06115 Genome accession   NZ_CP162517
Coordinates   1177269..1177460 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain BF12B1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1172269..1182460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3470_RS06085 (AB3470_06075) argF 1173133..1174092 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  AB3470_RS06090 (AB3470_06080) yjzC 1174178..1174357 (+) 180 WP_396285148.1 YjzC family protein -
  AB3470_RS06095 (AB3470_06085) yjzD 1174403..1174588 (-) 186 WP_003245236.1 YjzD family protein -
  AB3470_RS06100 (AB3470_06090) - 1174837..1175571 (+) 735 WP_140599917.1 hypothetical protein -
  AB3470_RS06105 (AB3470_06095) - 1175653..1176210 (+) 558 WP_003232974.1 hypothetical protein -
  AB3470_RS06110 (AB3470_06100) med 1176301..1177254 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  AB3470_RS06115 (AB3470_06105) comZ 1177269..1177460 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AB3470_RS06120 (AB3470_06110) yjzB 1177490..1177729 (-) 240 WP_003232972.1 spore coat protein YjzB -
  AB3470_RS06125 (AB3470_06115) fabH 1177894..1178832 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  AB3470_RS06130 (AB3470_06120) fabF 1178855..1180096 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  AB3470_RS06135 (AB3470_06125) yjaZ 1180172..1180957 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  AB3470_RS06140 (AB3470_06130) appD 1181149..1182135 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1026754 AB3470_RS06115 WP_003224559.1 1177269..1177460(+) (comZ) [Bacillus subtilis strain BF12B1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1026754 AB3470_RS06115 WP_003224559.1 1177269..1177460(+) (comZ) [Bacillus subtilis strain BF12B1]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment