Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB3470_RS02185 Genome accession   NZ_CP162517
Coordinates   430475..431425 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain BF12B1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 425475..436425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3470_RS02160 (AB3470_02160) rapC 426934..428082 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  AB3470_RS02165 (AB3470_02165) phrC 428066..428188 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  AB3470_RS02170 (AB3470_02170) yczM 428288..428377 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  AB3470_RS02175 (AB3470_02175) yczN 428459..428572 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  AB3470_RS02180 (AB3470_02180) thrD 428726..430090 (-) 1365 WP_396283657.1 aspartate kinase -
  AB3470_RS02185 (AB3470_02185) ceuB 430475..431425 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  AB3470_RS02190 (AB3470_02190) yclO 431418..432365 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  AB3470_RS02195 (AB3470_02195) yclP 432359..433117 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  AB3470_RS02200 (AB3470_02200) yclQ 433139..434092 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  AB3470_RS02205 (AB3470_02205) - 434322..435254 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=1026743 AB3470_RS02185 WP_014475804.1 430475..431425(+) (ceuB) [Bacillus subtilis strain BF12B1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1026743 AB3470_RS02185 WP_014475804.1 430475..431425(+) (ceuB) [Bacillus subtilis strain BF12B1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment