Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB4K07_RS23030 Genome accession   NZ_CP162509
Coordinates   5054567..5054977 (+) Length   136 a.a.
NCBI ID   WP_045181955.1    Uniprot ID   A0AB39B227
Organism   Pseudomonas sp. Hg3Tf     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5049567..5059977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4K07_RS23000 (AB4K07_23000) - 5049720..5050724 (-) 1005 WP_045181941.1 aspartate carbamoyltransferase catalytic subunit -
  AB4K07_RS23005 (AB4K07_23005) pyrR 5050737..5051255 (-) 519 WP_045181943.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB4K07_RS23010 (AB4K07_23010) ruvX 5051316..5051750 (-) 435 WP_045181945.1 Holliday junction resolvase RuvX -
  AB4K07_RS23015 (AB4K07_23015) - 5051750..5052319 (-) 570 WP_045181949.1 YqgE/AlgH family protein -
  AB4K07_RS23020 (AB4K07_23020) - 5052371..5053276 (-) 906 WP_045181951.1 energy transducer TonB -
  AB4K07_RS23025 (AB4K07_23025) gshB 5053386..5054339 (-) 954 WP_045181953.1 glutathione synthase -
  AB4K07_RS23030 (AB4K07_23030) pilG 5054567..5054977 (+) 411 WP_045181955.1 twitching motility response regulator PilG Regulator
  AB4K07_RS23035 (AB4K07_23035) pilH 5055023..5055388 (+) 366 WP_045181957.1 twitching motility response regulator PilH -
  AB4K07_RS23040 (AB4K07_23040) - 5055385..5055939 (+) 555 WP_082071297.1 chemotaxis protein CheW -
  AB4K07_RS23045 (AB4K07_23045) - 5055955..5058000 (+) 2046 WP_045181961.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14916.19 Da        Isoelectric Point: 5.5984

>NTDB_id=1026698 AB4K07_RS23030 WP_045181955.1 5054567..5054977(+) (pilG) [Pseudomonas sp. Hg3Tf]
MEQPGAALKVMVIDDSKTIRRTAQLLLSEVGCEVITATDGFDALAKIVDQHPQIIFVDVLMPRLDGYQTCALIKHNSAFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=1026698 AB4K07_RS23030 WP_045181955.1 5054567..5054977(+) (pilG) [Pseudomonas sp. Hg3Tf]
ATGGAACAGCCCGGCGCGGCACTGAAGGTGATGGTGATCGATGACTCGAAAACGATTCGTCGAACCGCCCAATTGTTGCT
CAGTGAGGTGGGGTGTGAAGTTATCACTGCCACTGACGGCTTTGATGCCCTGGCCAAGATCGTCGACCAGCATCCACAGA
TTATTTTTGTCGATGTGCTGATGCCGCGTCTGGATGGTTACCAGACCTGCGCCCTGATCAAGCACAACAGTGCCTTCAAG
GACACCCCAGTGATCCTCCTGTCGTCCCGTGACGGCTTGTTCGACAAGGCCAGGGGCCGTGTAGTCGGCTCCGATCAATT
TTTAACCAAGCCATTCAGCAAGGAAGAACTGCTGGACGCAATCAGGGCGCATGTGCCCGGGTTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.6

91.912

0.64

Multiple sequence alignment