Detailed information NTG1026672

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: AB4K17_RS25875
• Genome accession: NZ_CP162505
• Coordinates: 5009444..5010793 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225362.1
• Uniprot ID: -
• Organism: Bacillus cereus strain DJ29
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5004444..5015793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB4K17_RS25855 (AB4K17_25855)	secA	5004769..5007276 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
AB4K17_RS25860 (AB4K17_25860)	raiA	5007551..5008093 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
AB4K17_RS25865 (AB4K17_25865)	cspC	5008416..5008613 (-)	198	WP_001990088.1	cold shock protein CspC	-
AB4K17_RS25870 (AB4K17_25870)	-	5008740..5009444 (-)	705	WP_013142274.1	ComF family protein	-
AB4K17_RS25875 (AB4K17_25875)	comFA	5009444..5010793 (-)	1350	WP_000225362.1	ATP-dependent helicase ComFA	Machinery gene
AB4K17_RS25880 (AB4K17_25880)	-	5010921..5012348 (-)	1428	WP_071740931.1	NlpC/P60 family protein	-
AB4K17_RS25885 (AB4K17_25885)	-	5012497..5012811 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
AB4K17_RS25890 (AB4K17_25890)	-	5012984..5013826 (-)	843	WP_000684725.1	DegV family protein	-
AB4K17_RS25895 (AB4K17_25895)	-	5014063..5014698 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51174.04 Da
• Isoelectric Point: 9.9910

>NTDB_id=1026672 AB4K17_RS25875 WP_000225362.1 5009444..5010793(-) (comFA) [Bacillus cereus strain DJ29]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=1026672 AB4K17_RS25875 WP_000225362.1 5009444..5010793(-) (comFA) [Bacillus cereus strain DJ29]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49